MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2142A · 46 genes shown · anchor parE2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
parD2 (requalified) — antitoxin ParD2 parD2 parE2 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE2 Rv2143 (family_assigned) — phosphoribosyltransferase family protein Rv2143 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 parE1 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to parE1 vapC23 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC23 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 vapB29 (requalified) — antitoxin VapB29 vapB29 mazE6 (requalified) — antitoxin MazE6 mazE6 vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c Rv2019 (family_assigned) — hypothetical protein Rv2019 hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA Rv0574c (family_assigned) — CapA family protein Rv0574c Rv2625c (family_assigned) — site-2 protease family protein Rv2625c dapA (requalified) — 4-hydroxy-tetrahydrodipicolinate synthase dapA vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 cobB (requalified) — NAD-dependent protein deacylase cobB lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv2472 (dark) — hypothetical protein Rv2472 mazE9 (requalified) — antitoxin MazE9 mazE9 mazE3 (requalified) — antitoxin MazE3 mazE3 Rv1958c (dark) — hypothetical protein Rv1958c Rv1961 (family_assigned) — hypothetical protein Rv1961 vapB23 (requalified) — antitoxin VapB23 vapB23 Rv2862c (family_assigned) — DUF1707 domain-containing protein Rv2862c mapB (requalified) — methionine aminopeptidase mapB vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapB43 (family_assigned) — ribbon-helix-helix domain-containing protein vapB43 vapB13 (requalified) — antitoxin vapB13 PE_PGRS34 (family_assigned) — PE-PGRS family protein PE_PGRS34 PE_PGRS34 Rv2209 (requalified) — MFS transporter Rv2209 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 Rv0616c (dark) — Hypothetical protein Rv0616c galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galK (requalified) — galactokinase galK mazF6 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF6 mazF9 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF9 mazF1 (requalified) — toxin MazF1 mazF1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.