MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2141c · 46 genes shown · anchor ctaF · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2141c (family_assigned) — hypothetical protein Rv2141c TB18.6 (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein TB18.6 argC (requalified) — N-acetyl-gamma-glutamyl-phosphate reductase argC Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c argG (requalified) — argininosuccinate synthase argG glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS Rv2146c (family_assigned) — YggT family protein Rv2146c pafB (family_assigned) — YafY family protein pafB pepN (requalified) — aminopeptidase PepN pepN dapE (requalified) — succinyl-diaminopimelate desuccinylase DapE dapE rplP (requalified) — 50S ribosomal protein L16 rplP rplB (requalified) — 50S ribosomal protein L2 rplB rpsB (requalified) — 30S ribosomal protein S2 rpsB rplM (requalified) — 50S ribosomal protein L13 rplM rpsE (requalified) — 30S ribosomal protein S5 rpsE argD (requalified) — acetylornithine transaminase argD argB (requalified) — acetylglutamate kinase argB argJ (requalified) — bifunctional glutamate N-acetyltransferase/amino-a argJ argF (requalified) — ornithine carbamoyltransferase argF argR (requalified) — arginine repressor argR ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaE (family_assigned) — heme-copper oxidase subunit III ctaE qcrC (requalified) — cytochrome c qcrC qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB argH (requalified) — argininosuccinate lyase argH gltB (family_assigned) — glutamate synthase large subunit gltB mrsA (requalified) — phosphoglucosamine mutase mrsA glnA2 (family_assigned) — glutamine synthetase family protein glnA2 carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 Rv2147c (requalified) — cell division protein SepF Rv2147c wag31 (requalified) — cell wall synthesis protein Wag31 wag31 ftsZ (requalified) — cell division protein FtsZ ftsZ Rv2148c (family_assigned) — YggS family pyridoxal phosphate-dependent enzyme Rv2148c Rv2256c (dark) — hypothetical protein Rv2256c Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c pafC (family_assigned) — YafY family protein pafC pafA (requalified) — Pup--protein ligase pafA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA pepB (requalified) — leucyl aminopeptidase pepB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.