MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2134c · 46 genes shown · anchor uppP · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2134c (dark) — hypothetical protein Rv2134c Rv2133c (family_assigned) — SCO1664 family protein Rv2133c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c Rv2136c (requalified) — undecaprenyl-diphosphate phosphatase Rv2136c Rv2137c (dark) — hypothetical protein Rv2137c mshC (requalified) — cysteine--1-D-myo-inosityl 2-amino-2-deoxy-alpha-D mshC mshB (requalified) — N-acetyl-1-D-myo-inositol-2-amino-2-deoxy-alpha-D- mshB cysQ (requalified) — 3'(2')%2C5'-bisphosphate nucleotidase CysQ cysQ mca (requalified) — mycothiol conjugate amidase Mca mca mshD (requalified) — mycothiol synthase mshD lppL (family_assigned) — hypothetical protein lppL Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c Rv3753c (family_assigned) — hypothetical protein Rv3753c helZ (requalified) — DEAD/DEAH box helicase helZ TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 gpgP (requalified) — glucosyl-3-phosphoglycerate phosphatase gpgP murX (requalified) — phospho-N-acetylmuramoyl-pentapeptide-transferase murX cysE (requalified) — serine O-acetyltransferase cysE Rv2129c (family_assigned) — SDR family oxidoreductase Rv2129c mshA (requalified) — D-inositol-3-phosphate glycosyltransferase mshA Rv1171 (family_assigned) — hypothetical protein Rv1171 cysC (requalified) — adenylyl-sulfate kinase cysC cysD (family_assigned) — sulfate adenylyltransferase subunit CysD cysD cysH (requalified) — phosphoadenylyl-sulfate reductase cysH nrnA (requalified) — bifunctional oligoribonuclease/PAP phosphatase Nrn nrnA Rv1083 (dark) — hypothetical protein Rv1083 Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c Rv0360c (family_assigned) — hypothetical protein Rv0360c Rv0818 (requalified) — response regulator transcription factor Rv0818 ppk1 (requalified) — RNA degradosome polyphosphate kinase ppk1 Rv1998c (family_assigned) — isocitrate lyase/phosphoenolpyruvate mutase family Rv1998c Rv3212 (family_assigned) — hypothetical protein Rv3212 Rv0556 (family_assigned) — DUF3592 domain-containing protein Rv0556 Rv0996 (family_assigned) — hypothetical protein Rv0996 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv0431 (requalified) — tuberculin-like peptide Rv0431 rpiB (requalified) — ribose-5-phosphate isomerase B rpiB Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv2464c (family_assigned) — Fpg/Nei family DNA glycosylase Rv2464c Rv3752c (requalified) — nucleoside deaminase Rv3752c Rv3013 (family_assigned) — amino acid-binding protein Rv3013 tyrA (requalified) — prephenate dehydrogenase TyrA tyrA Rv3311 (family_assigned) — primosomal protein Rv3311

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.