MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2127 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
ansP1 (requalified) — L-asparagine permease ansP1 Rv2128 (dark) — hypothetical protein Rv2128 nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT ansA (requalified) — asparaginase ansA Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c mkl (family_assigned) — ABC transporter ATP-binding protein mkl glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnE (requalified) — bifunctional [glutamine synthetase] adenylyltransf glnE aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB mgtE (requalified) — magnesium transporter mgtE lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt Rv1903 (family_assigned) — phage holin family protein Rv1903 Rv1191 (family_assigned) — alpha/beta hydrolase Rv1191 lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ Rv1672c (requalified) — MFS transporter Rv1672c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 nicT (family_assigned) — HoxN/HupN/NixA family nickel/cobalt transporter nicT argG (requalified) — argininosuccinate synthase argG nadB (requalified) — L-aspartate oxidase nadB pyrB (family_assigned) — aspartate carbamoyltransferase catalytic subunit pyrB asnB (requalified) — asparagine synthase (glutamine-hydrolyzing) asnB purA (requalified) — adenylosuccinate synthase purA gadB (requalified) — glutamate decarboxylase gadB Rv1273c (family_assigned) — ABC transporter ATP-binding protein Rv1273c lprC (family_assigned) — DUF3558 domain-containing protein lprC lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv1218c (family_assigned) — multidrug efflux ABC transporter ATP-binding prote Rv1218c Rv0435c (family_assigned) — AAA family ATPase Rv0435c eccA2 (family_assigned) — type VII secretion system ESX-2 AAA family ATPase eccA2 yrbE1A (family_assigned) — ABC transporter permease yrbE1A yrbE1B (family_assigned) — ABC transporter permease yrbE1B yrbE3A (family_assigned) — ABC transporter permease yrbE3A Rv0588 (family_assigned) — ABC transporter permease Rv0588 yrbE4B (family_assigned) — ABC transporter permease yrbE4B yrbE3B (family_assigned) — ABC transporter permease yrbE3B gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA glnA2 (family_assigned) — glutamine synthetase family protein glnA2 caeB (requalified) — carboxylesterase CaeB caeB rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA caeA (requalified) — carboxylesterase CaeA caeA Rv2681 (requalified) — ribonuclease D Rv2681

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.