MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2125 · 46 genes shown · anchor metH · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2125 (family_assigned) — PAC2 family protein Rv2125 metH (requalified) — methionine synthase metH rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv1456c (requalified) — heme A synthase Rv1456c Rv0121c (family_assigned) — TIGR03668 family PPOX class F420-dependent oxidore Rv0121c Rv1828 (family_assigned) — MerR family transcriptional regulator Rv1828 Rv1321 (requalified) — endonuclease NucS Rv1321 Rv0504c (family_assigned) — MaoC family dehydratase N-terminal domain-containi Rv0504c prcB (family_assigned) — proteasome subunit beta prcB Rv3129 (family_assigned) — Conserved hypothetical protein Rv3129 Rv0080 (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0080 prcA (family_assigned) — proteasome subunit alpha prcA Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv2172c (requalified) — mycobacterial-type methylenetetrahydrofolate reduc Rv2172c metB (requalified) — cystathionine gamma-synthase metB metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metE (requalified) — 5-methyltetrahydropteroyltriglutamate--homocystein metE metC (requalified) — bifunctional o-acetylhomoserine/o-acetylserine sul metC sahH (requalified) — adenosylhomocysteinase sahH rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB sigA (requalified) — RNA polymerase sigma factor sigA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA helZ (requalified) — DEAD/DEAH box helicase helZ ctaB (requalified) — heme o synthase ctaB Rv1457c (family_assigned) — ABC transporter permease Rv1457c Rv1458c (family_assigned) — ABC transporter ATP-binding protein Rv1458c Rv2235 (family_assigned) — SURF1 family protein Rv2235 mptB (requalified) — polyprenol phosphomannose-dependent alpha 1%2C6 ma mptB qcrA (requalified) — hypothetical protein qcrA fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 Rv3079c (requalified) — LLM class F420-dependent oxidoreductase Rv3079c Rv0122 (family_assigned) — hypothetical protein Rv0122 Rv0123 (family_assigned) — DNA-binding protein Rv0123 garA (requalified) — glycogen accumulation regulator GarA garA Rv1332 (family_assigned) — transcriptional regulator Rv1332 Rv1829 (family_assigned) — hypothetical protein Rv1829 gcvH (requalified) — glycine cleavage system protein GcvH gcvH Rv1824 (family_assigned) — small basic family protein Rv1824 Rv1823 (family_assigned) — DUF881 domain-containing protein Rv1823 Rv1322 (family_assigned) — hypothetical protein Rv1322 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 Rv1830 (family_assigned) — HTH-type transcriptional regulator Rv1830 Rv1318c (family_assigned) — adenylate/guanylate cyclase domain-containing prot Rv1318c whiB2 (family_assigned) — transcriptional regulator WhiB2 whiB2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.