MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2113 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2113 (family_assigned) — integral membrane protein Rv2113 Rv2114 (dark) — hypothetical protein Rv2114 ptrp (family_assigned) — hypothetical protein ptrp cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv1775 (family_assigned) — hypothetical protein Rv1775 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv3732 (dark) — DUF2330 domain-containing protein Rv3732 Rv3788 (family_assigned) — GreA/GreB family elongation factor Rv3788 hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2843 (family_assigned) — hypothetical protein Rv2843 Rv0493c (family_assigned) — hypothetical protein Rv0493c rskA (requalified) — anti-sigma-K factor RskA rskA Rv1006 (family_assigned) — hypothetical protein Rv1006 Rv1868 (family_assigned) — NAD(P)H-binding protein Rv1868 hsr1 (requalified) — hypothetical protein hsr1 Rv2047c (family_assigned) — sugar epimerase family protein Rv2047c Rv3033 (requalified) — DUF4333 domain-containing protein Rv3033 Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv3909 (dark) — hypothetical protein Rv3909 ift (requalified) — necrotizing toxin immunity factor IFT ift esxE (requalified) — ESAT-6 like protein EsxE esxE eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 esxF (requalified) — pore-forming CpnT exporter EsxF esxF Rv3446c (family_assigned) — type VII secretion-associated protein Rv3446c Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c Rv1774 (requalified) — FAD-binding oxidoreductase Rv1774 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR embR (requalified) — response regulator transcription factor EmbR embR Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1 Rv3254 (requalified) — oxidoreductase Rv3254 vapB47 (requalified) — antitoxin VapB47 vapB47 rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.