MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2101 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
helZ (requalified) — DEAD/DEAH box helicase helZ Rv2102 (family_assigned) — hypothetical protein Rv2102 rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC Rv2133c (family_assigned) — SCO1664 family protein Rv2133c dnaN (family_assigned) — DNA polymerase III subunit beta dnaN lppK (family_assigned) — hypothetical protein lppK aofH (family_assigned) — flavin monoamine oxidase family protein aofH dinG (requalified) — ATP-dependent helicase DinG dinG polA (requalified) — DNA polymerase I polA recA (requalified) — intein-containing recombinase RecA recA sigA (requalified) — RNA polymerase sigma factor sigA rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 Rv2134c (dark) — hypothetical protein Rv2134c Rv2135c (family_assigned) — histidine phosphatase family protein Rv2135c TB22.2 (family_assigned) — RsiV family protein TB22.2 PE23 (family_assigned) — PE family protein PE23 PE23 PE_PGRS62 (family_assigned) — PE-PGRS family protein PE_PGRS62 PE_PGRS62 dnaE1 (family_assigned) — DNA polymerase III subunit alpha dnaE1 Rv2413c (family_assigned) — DNA polymerase III subunit delta Rv2413c Rv3644c (family_assigned) — DNA polymerase III subunit delta' Rv3644c dnaZX (family_assigned) — DNA polymerase III subunits gamma/tau dnaZX dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 ligC (requalified) — ATP-dependent DNA ligase ligC ligB (requalified) — ATP-dependent DNA ligase ligB Rv1703c (requalified) — O-methyltransferase Rv1703c adh (requalified) — zinc-binding dehydrogenase adh pcd (requalified) — piperideine-6-carboxylic acid dehydrogenase pcd adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv0223c (requalified) — aldehyde dehydrogenase Rv0223c mec (requalified) — CysO-cysteine peptidase mec Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2529 (family_assigned) — hypothetical protein Rv2529 Rv1278 (family_assigned) — AAA family ATPase Rv1278 recX (requalified) — recombination regulator RecX recX lexA (requalified) — transcriptional repressor LexA lexA radA (requalified) — DNA repair protein RadA radA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.