MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2096c · 38 genes shown · anchor pafC · open gene page → · ← back to 1 hop

Evidence: Min score 0
pafB (family_assigned) — YafY family protein pafB pafC (family_assigned) — YafY family protein pafC pafA (requalified) — Pup--protein ligase pafA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC prrB (requalified) — two-component system sensor histidine kinase PrrB prrB prrA (requalified) — two-component system response regulator PrrA prrA helY (requalified) — RNA helicase helY sigA (requalified) — RNA polymerase sigma factor sigA prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB mpa (requalified) — proteasome ATPase mpa helZ (requalified) — DEAD/DEAH box helicase helZ sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB tatC (family_assigned) — twin-arginine translocase subunit TatC tatC guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 trcR (requalified) — two-component system response regulator TrcR trcR phoP (requalified) — two-component system response regulator PhoP phoP tcrX (requalified) — two-component system response regulator TcrX tcrX mprA (requalified) — two-component system response regulator MprA mprA regX3 (requalified) — two component sensory transduction protein RegX regX3 Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c mprB (requalified) — two-component system sensor histidine kinase MprB mprB trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS tcrY (requalified) — two component sensor kinase TcrY tcrY senX3 (requalified) — two-component system sensor histidine kinase SenX3 senX3 cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB era (requalified) — GTPase Era era Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.