MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2095c · 27 genes shown · anchor pafB · open gene page → · ← back to 1 hop

Evidence: Min score 0
pafC (family_assigned) — YafY family protein pafC pafB (family_assigned) — YafY family protein pafB rbpA (family_assigned) — RNA polymerase-binding protein RbpA rbpA rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ pafA (requalified) — Pup--protein ligase pafA sigA (requalified) — RNA polymerase sigma factor sigA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC tatA (family_assigned) — Sec-independent protein translocase subunit TatA tatA helY (requalified) — RNA helicase helY sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB helZ (requalified) — DEAD/DEAH box helicase helZ prcA (family_assigned) — proteasome subunit alpha prcA pup (family_assigned) — ubiquitin-like protein Pup pup prcB (family_assigned) — proteasome subunit beta prcB mpa (requalified) — proteasome ATPase mpa whiB7 (family_assigned) — transcriptional regulator WhiB7 whiB7 whiB1 (family_assigned) — transcriptional regulator WhiB1 whiB1 sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL rpsM (requalified) — 30S ribosomal protein S13 rpsM rpsH (requalified) — 30S ribosomal protein S8 rpsH tatC (family_assigned) — twin-arginine translocase subunit TatC tatC guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA cobB (requalified) — cobyrinate a%2Cc-diamide synthase cobB era (requalified) — GTPase Era era Rv2091c (family_assigned) — DUF4333 domain-containing protein Rv2091c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.