MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2087 · 45 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2087 (family_assigned) — Conserved hypothetical protein Rv2087 Rv2085 (family_assigned) — hypothetical protein Rv2085 Rv2086 (family_assigned) — hypothetical protein Rv2086 Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv1733c (family_assigned) — hypothetical protein Rv1733c pknJ (requalified) — serine/threonine protein kinase PknJ pknJ Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv1947 (family_assigned) — hypothetical protein Rv1947 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv2083 (dark) — hypothetical protein Rv2083 Rv2084 (dark) — hypothetical protein Rv2084 Rv3896c (requalified) — transglycosylase Rv3896c mmpL7 (requalified) — phthiocerol dimycocerosate RND transporter MmpL7 mmpL7 Rv3349c (requalified) — transposase Rv3349c eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 Rv3134c (requalified) — universal stress protein Rv3134c acg (family_assigned) — FMN-binding protein Acg acg Rv2627c (family_assigned) — alpha/beta hydrolase Rv2627c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c narK2 (requalified) — nitrate transporter NarK narK2 pstP (requalified) — phosphoserine/threonine phosphatase PstP pstP garA (requalified) — glycogen accumulation regulator GarA garA fhaB (family_assigned) — FHA domain-containing protein fhaB fhaA (requalified) — cell division-associated protein FhaA fhaA pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB Rv2306A (family_assigned) — Possible conserved membrane protein Rv2306A PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 iniB (requalified) — isoniazid-induced protein IniB iniB Rv2306B (family_assigned) — Possible conserved membrane protein Rv2306B dinG (requalified) — ATP-dependent helicase DinG dinG rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ Rv2529 (family_assigned) — hypothetical protein Rv2529 polA (requalified) — DNA polymerase I polA eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 eccB2 (family_assigned) — type VII secretion system ESX-2 subunit EccB2 eccB2 eccC2 (family_assigned) — type VII secretion system ESX-2 FtsK/SpoIIIE famil eccC2 Rv3900c (family_assigned) — hypothetical protein Rv3900c Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 pykA (requalified) — pyruvate kinase pykA Rv2081c (dark) — hypothetical protein Rv2081c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.