MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2081c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2081c (dark) — hypothetical protein Rv2081c Rv2082 (dark) — DUF5631 domain-containing protein Rv2082 Rv2083 (dark) — hypothetical protein Rv2083 Rv2084 (dark) — hypothetical protein Rv2084 TB7.3 (requalified) — biotin/lipoyl-binding carrier protein TB7.3 Rv1374c (dark) — hypothetical protein Rv1374c Rv1805c (dark) — hypothetical protein Rv1805c Rv1734c (family_assigned) — hypothetical protein Rv1734c cas2 (requalified) — CRISPR-associated endonuclease Cas2 cas2 rne (family_assigned) — Rne/Rng family ribonuclease rne Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 idsA1 (requalified) — multifunctional dimethylallyltransferase/geranyltr idsA1 PE20 (family_assigned) — PE family protein PE20 PE20 Rv2086 (family_assigned) — hypothetical protein Rv2086 PE_PGRS16 (family_assigned) — PE-PGRS family protein PE_PGRS16 PE_PGRS16 eccD4 (family_assigned) — type VII secretion system ESX-4 subunit EccD4 eccD4 Rv2305 (family_assigned) — hypothetical protein Rv2305 Rv2085 (family_assigned) — hypothetical protein Rv2085 pykA (requalified) — pyruvate kinase pykA Rv2087 (family_assigned) — Conserved hypothetical protein Rv2087 accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 accA1 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA1 accA3 (family_assigned) — acetyl/propionyl/methylcrotonyl-CoA carboxylase su accA3 glcB (requalified) — malate synthase G glcB acs (requalified) — acetate--CoA ligase acs leuA (requalified) — 2-isopropylmalate synthase leuA Rv1375 (family_assigned) — YcaO-like family protein Rv1375 Rv1376 (family_assigned) — TfuA-like protein Rv1376 ino1 (requalified) — inositol-3-phosphate synthase ino1 Rv1954c (requalified) — hypothetical protein Rv1954c PPE31 (family_assigned) — PPE family protein PPE31 PPE31 Rv1804c (requalified) — DUF732 domain-containing protein Rv1804c lat (requalified) — L-lysine 6-transaminase lat bkdB (family_assigned) — 3-methyl-2-oxobutanoate dehydrogenase subunit beta bkdB Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv0843 (family_assigned) — thiamine pyrophosphate-dependent dehydrogenase E1 Rv0843 bkdA (family_assigned) — pyruvate dehydrogenase (acetyl-transferring) E1 co bkdA sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA lpdC (requalified) — dihydrolipoyl dehydrogenase lpdC cas1 (requalified) — CRISPR-associated endonuclease Cas1 cas1 cas10 (requalified) — type III-A CRISPR-associated protein Cas10/Csm1 cas10 csm3 (requalified) — type III-A CRISPR-associated RAMP protein Csm3 csm3 csm4 (requalified) — type III-A CRISPR-associated RAMP protein Csm4 csm4 Rv2824c (requalified) — CRISPR-associated endoribonuclease Cas6 Rv2824c csm5 (requalified) — type III-A CRISPR-associated RAMP protein Csm5 csm5 gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.