MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2080 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppJ (family_assigned) — hypothetical protein lppJ Rv2078 (family_assigned) — DUF2563 family protein Rv2078 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv1885c (requalified) — chorismate mutase Rv1885c lpqO (family_assigned) — DUF1259 domain-containing protein lpqO lppD (requalified) — lipoprotein LppD lppD fadD30 (requalified) — long-chain-fatty-acid--AMP ligase FadD30 fadD30 Rv0565c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv0565c Rv0323c (family_assigned) — PIG-L deacetylase family protein Rv0323c proZ (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proZ Rv2077A (dark) — hypothetical protein Rv2077A Rv3906c (requalified) — pullulanase Rv3906c Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv0048c (family_assigned) — DUF1707 domain-containing protein Rv0048c aroF (requalified) — chorismate synthase aroF fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB tyrA (requalified) — prephenate dehydrogenase TyrA tyrA pheA (requalified) — prephenate dehydratase pheA trpE (requalified) — anthranilate synthase component I trpE Rv0948c (requalified) — chorismate mutase Rv0948c Rv0603 (family_assigned) — hypothetical protein Rv0603 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c virS (family_assigned) — AraC family transcriptional regulator virS Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 embR (requalified) — response regulator transcription factor EmbR embR cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ cobB (requalified) — NAD-dependent protein deacylase cobB cinA (requalified) — competence/damage-inducible protein A cinA Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c Rv0143c (requalified) — chloride channel protein Rv0143c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c pks6 (requalified) — membrane bound polyketide synthase pks6 mbtE (requalified) — peptide synthetase mbtE mbtF (requalified) — peptide synthetase mbtF nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 Rv0566c (family_assigned) — YajQ family cyclic di-GMP-binding protein Rv0566c gpdA1 (requalified) — NAD(P)H-dependent glycerol-3-phosphate dehydrogena gpdA1 Rv0943c (dark) — hypothetical protein Rv0943c atpA (family_assigned) — F0F1 ATP synthase subunit alpha atpA Rv1507c (family_assigned) — WbqC family protein Rv1507c atpG (family_assigned) — F0F1 ATP synthase subunit gamma atpG

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.