MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2068c · 46 genes shown · anchor sigC · open gene page → · ← back to 1 hop

Evidence: Min score 0
blaC (requalified) — beta-lactamase blaC Rv2067c (requalified) — class I SAM-dependent methyltransferase Rv2067c sigC (requalified) — RNA polymerase sigma factor SigC sigC pepR (family_assigned) — pitrilysin family protein pepR gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI fecB (family_assigned) — iron-siderophore ABC transporter substrate-binding fecB Rv3364c (requalified) — serine protease inhibitor Rv3364c lipD (requalified) — lipase LipD lipD lipL (family_assigned) — serine hydrolase domain-containing protein lipL Rv3354 (requalified) — DUF732 domain-containing protein Rv3354 lipE (requalified) — lipase LipE lipE dacB (requalified) — D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-ala dacB lpqH (requalified) — lipoprotein LpqH lpqH Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 Rv3899c (family_assigned) — hypothetical protein Rv3899c Rv3435c (family_assigned) — DUF4436 domain-containing protein Rv3435c eccD2 (family_assigned) — type VII secretion system ESX-2 subunit EccD2 eccD2 Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv0093c (family_assigned) — membrane protein Rv0093c sigH (family_assigned) — sigma-70 family RNA polymerase sigma factor SigH sigH sigM (requalified) — ECF RNA polymerase sigma factor SigM sigM sigL (family_assigned) — sigma-70 family RNA polymerase sigma factor SigL sigL qcrA (requalified) — hypothetical protein qcrA qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB nuoF (family_assigned) — NADH-quinone oxidoreductase subunit NuoF nuoF nuoG (family_assigned) — NADH-quinone oxidoreductase subunit G nuoG nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoE (family_assigned) — NADH-quinone oxidoreductase subunit NuoE nuoE rhlE (requalified) — DEAD/DEAH box helicase rhlE rplD (requalified) — 50S ribosomal protein L4 rplD rplC (requalified) — 50S ribosomal protein L3 rplC rho (requalified) — transcription termination factor Rho rho rplT (requalified) — 50S ribosomal protein L20 rplT Rv0265c (family_assigned) — iron ABC transporter substrate-binding lipoprotein Rv0265c adhC (requalified) — NAD(P)-dependent alcohol dehydrogenase adhC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD serB2 (requalified) — phosphoserine phosphatase SerB serB2 Rv3038c (family_assigned) — methyltransferase domain-containing protein Rv3038c sodC (family_assigned) — superoxide dismutase family protein sodC Rv3362c (family_assigned) — ATP/GTP-binding protein Rv3362c Rv3363c (family_assigned) — DUF742 domain-containing protein Rv3363c Rv3365c (requalified) — sensor histidine kinase Rv3365c mfpA (requalified) — pentapeptide repeat protein MfpA mfpA spoU (requalified) — tRNA (cytidine(34)-2'-O)-methyltransferase spoU Rv0585c (family_assigned) — lysylphosphatidylglycerol synthase transmembrane d Rv0585c Rv1922 (requalified) — serine hydrolase Rv1922

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.