MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2060 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2060 (family_assigned) — integral membrane protein Rv2060 Rv2059 (family_assigned) — hypothetical protein Rv2059 mntH (requalified) — divalent metal cation transporter MntH mntH Rv3575c (family_assigned) — LacI family DNA-binding transcriptional regulator Rv3575c lppH (requalified) — lipoprotein LppH lppH zur (requalified) — zinc uptake transcriptional repressor Zur zur drrB (family_assigned) — daunorubicin ABC transporter permease DrrB drrB Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR proX (family_assigned) — glycine betaine/carnitine/choline/L-proline ABC tr proX furA (family_assigned) — Fur family transcriptional regulator furA rpmE (requalified) — 50S ribosomal protein L31 rpmE ideR (family_assigned) — iron-dependent transcriptional regulator IdeR ideR rpmB2 (requalified) — 50S ribosomal protein L28 rpmB2 rpsN2 (requalified) — 30S ribosomal protein S14 rpsN2 Rv0106 (family_assigned) — GTP-binding protein Rv0106 PPE3 (family_assigned) — PPE family protein PPE3 PPE3 rpmG1 (requalified) — 50S ribosomal protein L33 rpmG1 Rv0923c (family_assigned) — poly-gamma-glutamate hydrolase family protein Rv0923c Rv0925c (family_assigned) — flavodoxin family protein Rv0925c atpE (family_assigned) — F0F1 ATP synthase subunit C atpE Rv0926c (requalified) — diacylglycerol kinase Rv0926c Rv0264c (family_assigned) — allophanate hydrolase subunit 1 Rv0264c gltB (family_assigned) — glutamate synthase large subunit gltB guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA xylB (requalified) — FGGY-family carbohydrate kinase xylB Rv3577 (requalified) — hypothetical protein Rv3577 pheT (family_assigned) — phenylalanine--tRNA ligase subunit beta pheT bglS (requalified) — beta-glucosidase BglS bglS arsB2 (requalified) — arsenic transport integral membrane protein ArsB arsB2 Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA smtB (family_assigned) — metalloregulator ArsR/SmtB family transcription fa smtB sufR (family_assigned) — suf operon transcriptional regulator SufR sufR rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ drrA (family_assigned) — daunorubicin ABC transporter ATP-binding protein D drrA drrC (family_assigned) — ABC transporter permease drrC ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC papA5 (requalified) — phthiocerol/phthiodiolone dimycocerosyl transferas papA5 ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD Rv1403c (requalified) — class I SAM-dependent methyltransferase Rv1403c Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.