MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2051c · 46 genes shown · anchor fxsA · open gene page → · ← back to 1 hop

Evidence: Min score 0
ppm1 (requalified) — apolipoprotein N-acyltransferase ppm1 Rv2052c (requalified) — amidohydrolase Rv2052c fxsA (family_assigned) — FxsA family protein fxsA pepD (requalified) — serine protease PepD pepD Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c gca (requalified) — GDP-mannose 4%2C6-dehydratase gca aftD (family_assigned) — DUF3367 domain-containing protein aftD Rv3784 (requalified) — dTDP-glucose 4,6-dehydratase Rv3784 PPE2 (family_assigned) — PPE family protein PPE2 PPE2 pcnA (requalified) — poly(A) polymerase PcnA pcnA Rv0225 (family_assigned) — glycosyltransferase family 4 protein Rv0225 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB idsA2 (requalified) — bifunctional (2E%2C6E)-farnesyl/geranyl diphosphat idsA2 Rv2054 (family_assigned) — dienelactone hydrolase family protein Rv2054 Rv2915c (family_assigned) — amidohydrolase family protein Rv2915c Rv1382 (requalified) — transporter Rv1382 Rv0074 (family_assigned) — amidohydrolase family protein Rv0074 sigB (family_assigned) — sigma-70 family RNA polymerase sigma factor SigB sigB hsp (requalified) — stress-responsive chaperone Acr2 hsp moaB2 (family_assigned) — MogA/MoaB family molybdenum cofactor biosynthesis moaB2 mprB (requalified) — two-component system sensor histidine kinase MprB mprB mpa (requalified) — proteasome ATPase mpa htpX (requalified) — zinc metalloprotease HtpX htpX mprA (requalified) — two-component system response regulator MprA mprA Rv0205 (family_assigned) — AI-2E family transporter Rv0205 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 rsmA (requalified) — anti-sigma-M factor RsmA rsmA gmdA (requalified) — GDP-mannose 4%2C6-dehydratase gmdA gmhA (requalified) — D-sedoheptulose 7-phosphate isomerase gmhA gmhB (requalified) — D-glycero-alpha-D-manno-heptose-1%2C7-bisphosphate gmhB hddA (requalified) — D-alpha-D-heptose-7-phosphate kinase HddA hddA epiA (requalified) — GDP-L-fucose synthase epiA rpsS (requalified) — 30S ribosomal protein S19 rpsS aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv0224c (requalified) — class I SAM-dependent methyltransferase Rv0224c mmpA (requalified) — hypothetical protein mmpA mbtG (requalified) — NADPH-dependent L-lysine N(6)-monooxygenase MbtG mbtG Rv0227c (family_assigned) — membrane protein Rv0227c rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC rmlD (requalified) — dTDP-4-dehydrorhamnose reductase rmlD rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB galE3 (requalified) — UDP-glucose 4-epimerase GalE galE3 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.