MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2045c · 43 genes shown · anchor lppI · open gene page → · ← back to 1 hop

Evidence: Min score 0
lipT (requalified) — carboxylesterase LipT lipT Rv2044c (family_assigned) — hypothetical protein Rv2044c gmk (requalified) — guanylate kinase gmk Rv2681 (requalified) — ribonuclease D Rv2681 Rv1770 (family_assigned) — hypothetical protein Rv1770 rpsD (requalified) — 30S ribosomal protein S4 rpsD lpqL (family_assigned) — M28 family metallopeptidase lpqL rpsK (requalified) — 30S ribosomal protein S11 rpsK lppI (family_assigned) — hypothetical protein lppI rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD rpsA (requalified) — 30S ribosomal protein S1 rpsA rpsQ (requalified) — 30S ribosomal protein S17 rpsQ Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c pncA (requalified) — pyrazinamidase PncA pncA Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC rpoZ (family_assigned) — DNA-directed RNA polymerase subunit omega rpoZ guaA (requalified) — glutamine-hydrolyzing GMP synthase guaA apt (requalified) — adenine phosphoribosyltransferase apt pykA (requalified) — pyruvate kinase pykA ndkA (requalified) — nucleoside-diphosphate kinase ndkA hpt (requalified) — hypoxanthine phosphoribosyltransferase hpt rphA (requalified) — ribonuclease PH rphA Rv2680 (dark) — DUF3000 domain-containing protein Rv2680 rplD (requalified) — 50S ribosomal protein L4 rplD Rv1769 (requalified) — amino acid deaminase/aldolase Rv1769 Rv1771 (requalified) — L-gulono-1%2C4-lactone dehydrogenase Rv1771 rpsM (requalified) — 30S ribosomal protein S13 rpsM rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC lpqM (requalified) — neutral zinc metallopeptidase lpqM thiS (requalified) — sulfur carrier protein ThiS thiS otsB2 (requalified) — trehalose-phosphatase otsB2 rplM (requalified) — 50S ribosomal protein L13 rplM rplF (requalified) — 50S ribosomal protein L6 rplF rplQ (requalified) — 50S ribosomal protein L17 rplQ rpsC (requalified) — 30S ribosomal protein S3 rpsC rplU (requalified) — 50S ribosomal protein L21 rplU

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.