MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2042c · 46 genes shown · anchor pncA · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2042c (family_assigned) — ketosteroid isomerase family protein Rv2042c pncA (requalified) — pyrazinamidase PncA pncA Rv2041c (family_assigned) — sugar ABC transporter substrate-binding protein Rv2041c Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c Rv2876 (requalified) — transmembrane protein Rv2876 chiZ (requalified) — cell wall hydrolase ChiZ chiZ Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv3035 (family_assigned) — hypothetical protein Rv3035 Rv2044c (family_assigned) — hypothetical protein Rv2044c Rv2039c (family_assigned) — carbohydrate ABC transporter permease Rv2039c Rv2040c (family_assigned) — sugar ABC transporter permease Rv2040c pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 cobB (requalified) — NAD-dependent protein deacylase cobB iunH (requalified) — nucleoside hydrolase IunH iunH deoD (requalified) — purine-nucleoside phosphorylase deoD ugpC (family_assigned) — sn-glycerol-3-phosphate ABC transporter ATP-bindin ugpC sugB (family_assigned) — trehalose ABC transporter permease SugB sugB sugA (family_assigned) — trehalose ABC transporter permease SugA sugA uspB (family_assigned) — sugar ABC transporter permease UspB uspB Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv3707c (requalified) — hypothetical protein Rv3707c lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv0466 (requalified) — acyl-[acyl-carrier-protein] thioesterase Rv0466 lipE (requalified) — lipase LipE lipE ephC (requalified) — epoxide hydrolase EphC ephC pks13 (requalified) — polyketide synthase Pks13 pks13 pks12 (requalified) — type I polyketide synthase pks12 ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA pirG (requalified) — exported repetitive protein pirG ctaC (family_assigned) — cytochrome c oxidase subunit II ctaC ctaD (family_assigned) — cytochrome c oxidase subunit I ctaD qcrB (family_assigned) — cytochrome bc complex cytochrome b subunit qcrB qcrA (requalified) — hypothetical protein qcrA Rv2199c (family_assigned) — cytochrome c oxidase subunit 4 Rv2199c qcrC (requalified) — cytochrome c qcrC lexA (requalified) — transcriptional repressor LexA lexA Rv2743c (family_assigned) — hypothetical protein Rv2743c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.