MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2019 · 44 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv2016 (dark) — hypothetical protein Rv2016 relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 relK (family_assigned) — Txe/YoeB family addiction module toxin relK vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapC13 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC13 Rv2022c (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv2022c relJ (requalified) — type II toxin-antitoxin system antitoxin RelJ relJ Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv1765c (family_assigned) — hypothetical protein Rv1765c relB (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant relB relF (requalified) — type II toxin-antitoxin system antitoxin RelF relF Rv1245c (family_assigned) — SDR family NAD(P)-dependent oxidoreductase Rv1245c mazF2 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF2 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c Rv3750c (requalified) — excisionase Rv3750c Rv2310 (requalified) — excisionase Rv2310 Rv0330c (family_assigned) — helix-turn-helix domain-containing protein Rv0330c Rv1045 (family_assigned) — nucleotidyl transferase AbiEii/AbiGii toxin family Rv1045 Rv0837c (family_assigned) — type IV toxin-antitoxin system AbiEi family antito Rv0837c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv0268c (family_assigned) — hypothetical protein Rv0268c Rv3359 (requalified) — NADH:flavin oxidoreductase Rv3359 folD (requalified) — bifunctional methylenetetrahydrofolate dehydrogena folD vapB1 (requalified) — antitoxin VapB1 vapB1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.