MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2018 · 45 genes shown · anchor vapB49 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv2019 (family_assigned) — hypothetical protein Rv2019 Rv3181c (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant Rv3181c vapC26 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC26 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC16 (requalified) — ribonuclease VapC16 vapC16 vapC29 (requalified) — type II toxin-antitoxin system ribonuclease VapC29 vapC29 vapC44 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC44 vapC38 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC38 Rv2735c (requalified) — three-Cys-motif partner protein TcmP Rv2735c Rv3098A (family_assigned) — PemK-like protein Rv3098A vapC39 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC39 Rv2016 (dark) — hypothetical protein Rv2016 Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE Rv3749c (family_assigned) — hypothetical protein Rv3749c Rv3182 (family_assigned) — type II toxin-antitoxin system RelE/ParE family to Rv3182 Rv3180c (family_assigned) — type II toxin-antitoxin system VapC family toxin Rv3180c Rv2308 (family_assigned) — DUF433 domain-containing protein Rv2308 PPE8 (family_assigned) — PPE family protein PPE8 PPE8 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PPE55 (family_assigned) — PPE family protein PPE55 PPE55 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv0580c (requalified) — mycobacterial cell wall protein Rv0580c Rv0580c Rv3387 (requalified) — transposase Rv3387 Rv2961 (requalified) — transposase Rv2961 vapC18 (family_assigned) — PIN domain nuclease vapC18 vapB9 (requalified) — antitoxin VapB9 vapB9 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 PPE56 (family_assigned) — PPE family protein PPE56 PPE56 PPE34 (family_assigned) — PPE family protein PPE34 PPE34 PPE5 (family_assigned) — PPE family protein PPE5 PPE5 vapB29 (requalified) — antitoxin VapB29 vapB29 Rv0616c (dark) — Hypothetical protein Rv0616c galTa (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTa galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb galK (requalified) — galactokinase galK vapB44 (family_assigned) — CopG family transcriptional regulator vapB44 Rv3322c (requalified) — methyltransferase Rv3322c moaX (requalified) — MoaD-MoaE fusion protein MoaX moaX moaC3 (requalified) — cyclic pyranopterin monophosphate synthase MoaC moaC3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.