MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2017 · 46 genes shown · anchor relE · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2017 (family_assigned) — ImmA/IrrE family metallo-endopeptidase Rv2017 Rv2016 (dark) — hypothetical protein Rv2016 Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R Rv3066 (family_assigned) — TetR/AcrR family transcriptional regulator Rv3066 Rv2011c (family_assigned) — MarR family winged helix-turn-helix transcriptiona Rv2011c Rv3334 (family_assigned) — hypoxia response transcriptional regulator Rv3334 Rv0332 (family_assigned) — hypothetical protein Rv0332 Rv0767c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0767c Rv2515c (family_assigned) — XRE family transcriptional regulator Rv2515c Rv2018 (family_assigned) — DUF433 domain-containing protein Rv2018 Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv2019 (family_assigned) — hypothetical protein Rv2019 rsmH (requalified) — 16S rRNA (cytosine(1402)-N(4))-methyltransferase R rsmH Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv0790c (family_assigned) — transglutaminase-like domain-containing protein Rv0790c Rv0791c (requalified) — LLM class flavin-dependent oxidoreductase Rv0791c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 virS (family_assigned) — AraC family transcriptional regulator virS Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR embR (requalified) — response regulator transcription factor EmbR embR Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c mmr (requalified) — multidrug resistance protein Mmr mmr sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv2012 (family_assigned) — hypothetical protein Rv2012 dnaJ2 (requalified) — molecular chaperone DnaJ dnaJ2 dnaJ1 (requalified) — chaperone protein DnaJ dnaJ1 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 Rv0333 (family_assigned) — nuclear transport factor 2 family protein Rv0333 rmlA (requalified) — glucose-1-phosphate thymidylyltransferase RfbA rmlA Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 udgA (family_assigned) — UDP-glucose/GDP-mannose dehydrogenase family prote udgA plsC (family_assigned) — HAD-IB family hydrolase plsC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.