MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2010 · 46 genes shown · anchor vapB15 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC15 (family_assigned) — PIN domain nuclease vapC15 vapB15 (requalified) — antitoxin VapB15 vapB15 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv2008c (family_assigned) — hypothetical protein Rv2008c vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB41 (requalified) — antitoxin VapB41 vapB41 vapB14 (requalified) — antitoxin vapB14 vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 fdxA (family_assigned) — ferredoxin family protein fdxA Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 ethR (family_assigned) — HTH-type transcriptional regulator EthR ethR sirR (family_assigned) — manganese-binding transcriptional regulator MntR sirR Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv1950c (dark) — hypothetical protein Rv1950c Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1951c (dark) — hypothetical protein Rv1951c Rv1948c (family_assigned) — hypothetical protein Rv1948c vapB20 (requalified) — type II toxin-antitoxin system antitoxin VapB20 vapB20 vapB26 (requalified) — type II toxin-antitoxin system antitoxin VapB26 vapB26 Rv2548A (dark) — hypothetical protein Rv2548A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.