MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2008c · 24 genes shown · anchor vapC15 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2008c (family_assigned) — hypothetical protein Rv2008c vapC15 (family_assigned) — PIN domain nuclease vapC15 vapB15 (requalified) — antitoxin VapB15 vapB15 fdxA (family_assigned) — ferredoxin family protein fdxA Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapB11 (requalified) — antitoxin VapB11 vapB11 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 Rv1996 (requalified) — universal stress protein Rv1996 hspX (requalified) — alpha-crystallin HspX hspX Rv3134c (requalified) — universal stress protein Rv3134c Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv2803 (family_assigned) — hypothetical protein Rv2803 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.