MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv2005c · 46 genes shown · anchor otsB1 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv2005c (requalified) — universal stress protein Rv2005c Rv2004c (family_assigned) — AAA family ATPase Rv2004c Rv2003c (family_assigned) — hypothetical protein Rv2003c otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 devR (requalified) — two-component system response regulator DevR devR Rv2629 (family_assigned) — hypothetical protein Rv2629 devS (requalified) — two-component system sensor histidine kinase DevS devS Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv2624c (requalified) — universal stress protein Rv2624c ctpF (requalified) — cation-transporting P-type ATPase ctpF nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ narX (family_assigned) — respiratory nitrate reductase subunit gamma narX Rv0571c (family_assigned) — phosphoribosyltransferase family protein Rv0571c otsB2 (requalified) — trehalose-phosphatase otsB2 treS (requalified) — maltose alpha-D-glucosyltransferase treS treZ (requalified) — malto-oligosyltrehalose trehalohydrolase treZ Rv3401 (family_assigned) — glycoside hydrolase family 65 protein Rv3401 Rv2402 (requalified) — trehalase Rv2402 Rv3134c (requalified) — universal stress protein Rv3134c dosT (requalified) — two-component system sensor histidine kinase DosT dosT Rv0845 (requalified) — sensor histidine kinase NarS Rv0845 Rv2630 (requalified) — archease Rv2630 rpsC (requalified) — 30S ribosomal protein S3 rpsC rplW (requalified) — 50S ribosomal protein L23 rplW Rv2631 (requalified) — RNA-splicing ligase RtcB Rv2631 hemK (requalified) — peptide chain release factor N(5)-glutamine methyl hemK cyp135B1 (requalified) — cytochrome P450 cyp135B1 Rv2625c (family_assigned) — site-2 protease family protein Rv2625c hrp1 (requalified) — hypoxic response protein Hrp1 hrp1 Rv2028c (requalified) — universal stress protein Rv2028c pfkB (family_assigned) — 1-phosphofructokinase family hexose kinase pfkB acg (family_assigned) — FMN-binding protein Acg acg Rv2030c (family_assigned) — erythromycin esterase family protein Rv2030c nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 nrdB (requalified) — R2-like ligand-binding oxidase nrdB Rv0038 (family_assigned) — YqgE/AlgH family protein Rv0038 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk narK2 (requalified) — nitrate transporter NarK narK2 narH (family_assigned) — nitrate reductase subunit beta narH narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU narK1 (requalified) — nitrate/nitrite transporter narK1 narK3 (requalified) — nitrate/nitrite transporter narK3 Rv0574c (family_assigned) — CapA family protein Rv0574c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.