MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1987 · 46 genes shown · anchor pirG · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1987 (family_assigned) — cellulose-binding protein Rv1987 pirG (requalified) — exported repetitive protein pirG sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c lprO (family_assigned) — phosphodiester glycosidase family protein lprO glnX (requalified) — protein kinase G-activating protein GlnX glnX wag31 (requalified) — cell wall synthesis protein Wag31 wag31 Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA Rv1158c (dark) — hypothetical protein Rv1158c mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3415c (family_assigned) — hypothetical protein Rv3415c Rv3717 (family_assigned) — hypothetical protein Rv3717 Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv0314c (family_assigned) — membrane protein Rv0314c Rv3707c (requalified) — hypothetical protein Rv3707c Rv0517 (requalified) — acyltransferase Rv0517 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv3906c (requalified) — pullulanase Rv3906c glcB (requalified) — malate synthase G glcB Rv1835c (family_assigned) — CocE/NonD family hydrolase Rv1835c Rv1324 (requalified) — co-chaperone YbbN Rv1324 ubiA (requalified) — decaprenyl-phosphate phosphoribosyltransferase ubiA Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 35kd_ag (family_assigned) — hypothetical protein 35kd_ag lppL (family_assigned) — hypothetical protein lppL chiZ (requalified) — cell wall hydrolase ChiZ chiZ lmeA (requalified) — mannan chain length control protein LmeA lmeA mca (requalified) — mycothiol conjugate amidase Mca mca Rv1083 (dark) — hypothetical protein Rv1083 Rv1081c (dark) — DUF4307 domain-containing protein Rv1081c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.