MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1986 · 33 genes shown · anchor lysG · open gene page → · ← back to 1 hop

Evidence: Min score 0
lysE (requalified) — L-lysine exporter lysE Rv1985c (family_assigned) — ArgP/LysG family DNA-binding transcriptional regul Rv1985c lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv2658c (family_assigned) — hypothetical protein Rv2658c Rv1404 (family_assigned) — MarR family transcriptional regulator Rv1404 Rv1979c (family_assigned) — APC family permease Rv1979c Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv3183 (family_assigned) — XRE family transcriptional regulator Rv3183 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 lat (requalified) — L-lysine 6-transaminase lat Rv3292 (family_assigned) — VOC family protein Rv3292 cobB (requalified) — NAD-dependent protein deacylase cobB oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv2659c (requalified) — tyrosine-type recombinase/integrase Rv2659c Rv2657c (family_assigned) — helix-turn-helix domain-containing protein Rv2657c Rv2655c (family_assigned) — DUF3631 domain-containing protein Rv2655c Rv2654c (requalified) — type II toxin-antitoxin system antitoxin Rv2654c Rv2656c (dark) — DUF2742 domain-containing protein Rv2656c Rv2653c (requalified) — type II toxin-antitoxin system toxin Rv2653c Rv1403c (requalified) — class I SAM-dependent methyltransferase Rv1403c Rv1619 (requalified) — bifunctional lysylphosphatidylglycerol flippase/sy Rv1619 Rv2060 (family_assigned) — integral membrane protein Rv2060 mmpR5 (family_assigned) — siderophore transport transcriptional regulator Mm mmpR5 Rv0194 (family_assigned) — ABC transporter ATP-binding protein Rv0194 fmu (requalified) — 16S rRNA m5C967 methyltransferase fmu aglA (family_assigned) — glycoside hydrolase family 13 protein aglA treS (requalified) — maltose alpha-D-glucosyltransferase treS glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE mpt64 (requalified) — immunoprotective protein Mpt64 mpt64 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv3492c (requalified) — Mce associated protein Rv3492c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.