MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1983 · 45 genes shown · anchor vapC36 · open gene page → · ← back to 1 hop

Evidence: Min score 0
PE_PGRS35 (family_assigned) — PE-PGRS family protein PE_PGRS35 PE_PGRS35 vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapB36 (requalified) — antitoxin VapB36 vapB36 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 Rv1979c (family_assigned) — APC family permease Rv1979c erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) Rv1987 (family_assigned) — cellulose-binding protein Rv1987 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk aglA (family_assigned) — glycoside hydrolase family 13 protein aglA treS (requalified) — maltose alpha-D-glucosyltransferase treS glgE (requalified) — alpha-1,4-glucan:maltose-1-phosphate maltosyltrans glgE mpt64 (requalified) — immunoprotective protein Mpt64 mpt64 Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv3492c (requalified) — Mce associated protein Rv3492c rpsD (requalified) — 30S ribosomal protein S4 rpsD rpsI (requalified) — 30S ribosomal protein S9 rpsI rpsJ (requalified) — 30S ribosomal protein S10 rpsJ rpsG (requalified) — 30S ribosomal protein S7 rpsG rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rpsO (requalified) — 30S ribosomal protein S15 rpsO pirG (requalified) — exported repetitive protein pirG sigD (requalified) — ECF RNA polymerase sigma factor SigD sigD Rv0315 (requalified) — family 16 glycosylhydrolase Rv0315 Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0210 (family_assigned) — hypothetical protein Rv0210 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.