MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1982c · 45 genes shown · anchor vapB30 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC36 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC36 vapB30 (requalified) — type II toxin-antitoxin system antitoxin VapB30 vapB30 vapB36 (requalified) — antitoxin VapB36 vapB36 vapB34 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB34 PE_PGRS35 (family_assigned) — PE-PGRS family protein PE_PGRS35 PE_PGRS35 vapB11 (requalified) — antitoxin VapB11 vapB11 Rv0919 (family_assigned) — GNAT family N-acetyltransferase Rv0919 nrdF1 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF1 vapB42 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB42 vapB28 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB28 mce3D (family_assigned) — virulence factor Mce family protein mce3D vapC30 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC30 vapC28 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC28 vapC42 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC42 vapC34 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC34 Rv0622 (dark) — DUF732 domain-containing protein Rv0622 lrpA (family_assigned) — transcriptional regulator LrpA lrpA Rv1742 (family_assigned) — hypothetical protein Rv1742 Rv0273c (family_assigned) — TetR/AcrR family transcriptional regulator Rv0273c Rv1979c (family_assigned) — APC family permease Rv1979c erm(37) (requalified) — 23S rRNA (adenine(2058)-N(6))-methyltransferase Er erm(37) Rv1987 (family_assigned) — cellulose-binding protein Rv1987 vapC11 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC11 vapC15 (family_assigned) — PIN domain nuclease vapC15 cobB (requalified) — NAD-dependent protein deacylase cobB Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 parD1 (family_assigned) — type II toxin-antitoxin system ParD family antitox parD1 Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv0918 (family_assigned) — DUF1778 domain-containing protein Rv0918 Rv2803 (family_assigned) — hypothetical protein Rv2803 nrdE (family_assigned) — ribonucleoside-diphosphate reductase subunit alpha nrdE nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ nrdI (requalified) — class Ib ribonucleoside-diphosphate reductase asse nrdI nrdF2 (family_assigned) — ribonucleoside-diphosphate reductase subunit beta nrdF2 tmk (requalified) — dTMP kinase tmk cmk (requalified) — (d)CMP kinase cmk hsdS (family_assigned) — restriction endonuclease subunit S hsdS Rv2762c (family_assigned) — winged helix-turn-helix domain-containing protein Rv2762c sigJ (family_assigned) — sigma-70 family RNA polymerase sigma factor SigJ sigJ Rv3488 (family_assigned) — PadR family transcriptional regulator Rv3488 Rv0609A (dark) — hypothetical protein Rv0609A Rv0607 (dark) — hypothetical protein Rv0607 Rv0605 (family_assigned) — IS607-like element IS1536 family transposase Rv0605 yrbE3B (family_assigned) — ABC transporter permease yrbE3B mce3A (family_assigned) — Mce family protein Mce3A mce3A

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.