MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1963c · 46 genes shown · anchor iniR · open gene page → · ← back to 1 hop

Evidence: Min score 0
mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR embR (requalified) — response regulator transcription factor EmbR embR Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c virS (family_assigned) — AraC family transcriptional regulator virS kdpE (requalified) — two-component system response regulator KdpE kdpE Rv2912c (family_assigned) — TetR/AcrR family transcriptional regulator Rv2912c Rv0494 (family_assigned) — HTH-type transcriptional regulator Rv0494 Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv1776c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1776c moaR1 (family_assigned) — transcriptional regulator MoaR1 moaR1 Rv3736 (family_assigned) — AraC family transcriptional regulator Rv3736 Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv2488c (family_assigned) — LuxR family transcriptional regulator Rv2488c mftR (family_assigned) — mycofactocin system transcriptional regulator mftR Rv1556 (family_assigned) — TetR/AcrR family transcriptional regulator Rv1556 Rv1167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv1167c Rv1930c (requalified) — glutamine amidotransferase Rv1930c Rv1725c (family_assigned) — winged helix-turn-helix transcriptional regulator Rv1725c sigI (requalified) — RNA polymerase sigma factor SigI sigI cobB (requalified) — NAD-dependent protein deacylase cobB nadE (requalified) — NAD(+) synthase nadE ppnK (requalified) — NAD kinase ppnK pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 cinA (requalified) — competence/damage-inducible protein A cinA oxyS (family_assigned) — LysR family transcriptional regulator OxyS oxyS Rv1359 (family_assigned) — transcriptional regulator Rv1359 Rv3829c (requalified) — NAD(P)/FAD-dependent oxidoreductase Rv3829c Rv3840 (family_assigned) — transcriptional regulator Rv3840 Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 kdpD (requalified) — sensor histidine kinase KdpD kdpD trcR (requalified) — two-component system response regulator TrcR trcR trcS (family_assigned) — HAMP domain-containing sensor histidine kinase trcS kdpA (family_assigned) — potassium-transporting ATPase subunit KdpA kdpA Rv0600c (requalified) — two component sensor kinase HK1 Rv0600c Rv2913c (family_assigned) — amidohydrolase family protein Rv2913c Rv3833 (family_assigned) — helix-turn-helix transcriptional regulator Rv3833 Rv1773c (family_assigned) — IclR family transcriptional regulator Rv1773c Rv0792c (family_assigned) — GntR family transcriptional regulator Rv0792c tcrA (family_assigned) — two component DNA binding transcriptional regulato tcrA

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.