MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1962c · 45 genes shown · anchor vapB35 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC35 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC35 vapB35 (requalified) — antitoxin VapB35 vapB35 vapB46 (requalified) — antitoxin VapB46 vapB46 mce3R (family_assigned) — TetR family transcriptional regulator Mce3R mce3R vapB47 (requalified) — antitoxin VapB47 vapB47 vapC12 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC12 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 vapC9 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC9 vapC1 (requalified) — type II toxin-antitoxin system ribonuclease VapC1 vapC1 vapC3 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC3 vapC8 (family_assigned) — PIN domain-containing protein vapC8 mazF3 (requalified) — type II toxin-antitoxin system toxin endoribonucle mazF3 vapB31 (family_assigned) — ribbon-helix-helix protein%2C CopG family vapB31 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 Rv3386 (requalified) — transposase Rv3386 iniR (family_assigned) — isoniazid response ATPase/transcriptional regulato iniR embR (requalified) — response regulator transcription factor EmbR embR Rv0452 (family_assigned) — TetR family transcriptional regulator Rv0452 Rv1931c (family_assigned) — transcriptional regulator Rv1931c nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR Rv3167c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3167c Rv3406 (requalified) — alpha-ketoglutarate-dependent sulfate ester dioxyg Rv3406 vapB12 (requalified) — antitoxin vapB12 Rv3098A (family_assigned) — PemK-like protein Rv3098A mazE9 (requalified) — antitoxin MazE9 mazE9 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 Rv3479 (requalified) — transmembrane protein Rv3479 vapB9 (requalified) — antitoxin VapB9 vapB9 Rv0959 (family_assigned) — VWA domain-containing protein Rv0959 Rv0958 (family_assigned) — ATP-binding protein Rv0958 vapB1 (requalified) — antitoxin VapB1 vapB1 Rv0064 (family_assigned) — UPF0182 family protein Rv0064 vapB3 (family_assigned) — type II toxin-antitoxin system CcdA family antitox vapB3 vapB8 (requalified) — antitoxin VapB8 vapB8 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD mazE3 (requalified) — antitoxin MazE3 mazE3 mazE6 (requalified) — antitoxin MazE6 mazE6 mazF5 (family_assigned) — type II toxin-antitoxin system PemK/MazF family to mazF5 vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 vapC25 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC25 PE_PGRS10 (family_assigned) — PE-PGRS family protein PE_PGRS10 PE_PGRS10

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.