MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1954A · 46 genes shown · anchor higB · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1954A (dark) — Hypothetical protein Rv1954A rpfE (requalified) — resuscitation-promoting factor protein RpfE rpfE rpfC (requalified) — resuscitation-promoting factor RpfC rpfC rpfD (requalified) — resuscitation-promoting factor protein RpfD rpfD rpfA (requalified) — resuscitation-promoting factor protein RpfA rpfA Rv1861 (family_assigned) — GlsB/YeaQ/YmgE family stress response membrane pro Rv1861 higB (requalified) — type II toxin-antitoxin system toxin HigB higB Rv3491 (family_assigned) — hypothetical protein Rv3491 otsA (requalified) — trehalose-6-phosphate synthase otsA Rv1957 (requalified) — SecB-like chaperone Rv1957 higA (requalified) — type II toxin-antitoxin system antitoxin HigA higA Rv2771c (family_assigned) — flavodoxin family protein Rv2771c Rv0925c (family_assigned) — flavodoxin family protein Rv0925c Rv2449c (family_assigned) — trans-acting enoyl reductase family protein Rv2449c Rv2451 (dark) — hypothetical protein Rv2451 Rv0007 (dark) — DUF3566 domain-containing protein Rv0007 Rv3268 (family_assigned) — hypothetical protein Rv3268 Rv2286c (family_assigned) — DsbA family protein Rv2286c Rv1883c (family_assigned) — SRPBCC family protein Rv1883c Rv1815 (family_assigned) — hypothetical protein Rv1815 Rv1885c (requalified) — chorismate mutase Rv1885c fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv1882c (family_assigned) — SDR family oxidoreductase Rv1882c Rv2390c (family_assigned) — hypothetical protein Rv2390c hemN (requalified) — oxygen-independent coproporphyrinogen III oxidase hemN Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 Rv0316 (family_assigned) — muconolactone Delta-isomerase family protein Rv0316 Rv3737 (family_assigned) — threonine/serine exporter family protein Rv3737 Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c adhA (family_assigned) — zinc-binding alcohol dehydrogenase family protein adhA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c egtD (requalified) — L-histidine N(alpha)-methyltransferase egtD apa (family_assigned) — hypothetical protein apa modC (family_assigned) — sulfate/molybdate ABC transporter ATP-binding prot modC cbs (requalified) — cystathionine beta-synthase cbs guaB1 (family_assigned) — GuaB1 family IMP dehydrogenase-related protein guaB1 Rv2021c (family_assigned) — XRE family transcriptional regulator Rv2021c otsB1 (requalified) — trehalose-6-phosphate phosphatase OtsB otsB1 otsB2 (requalified) — trehalose-phosphatase otsB2 Rv3489 (family_assigned) — hypothetical protein Rv3489 galU (requalified) — UTP--glucose-1-phosphate uridylyltransferase galU Rv3032 (requalified) — glycogen synthase Rv3032 glgC (requalified) — glucose-1-phosphate adenylyltransferase glgC relE (requalified) — type II toxin-antitoxin system mRNA interferase Re relE PPE55 (family_assigned) — PPE family protein PPE55 PPE55

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.