MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1953 · 40 genes shown · anchor vapB14 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapC14 (requalified) — ribonuclease VapC14 vapC14 vapB14 (requalified) — antitoxin vapB14 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1950c (dark) — hypothetical protein Rv1950c Rv1951c (dark) — hypothetical protein Rv1951c Rv1948c (family_assigned) — hypothetical protein Rv1948c mazF7 (requalified) — mRNA interferase MazF7 mazF7 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 vapB41 (requalified) — antitoxin VapB41 vapB41 vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC8 (family_assigned) — PIN domain-containing protein vapC8 Rv0597c (family_assigned) — ATP-binding protein Rv0597c vapC27 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC27 vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv3479 (requalified) — transmembrane protein Rv3479 leuS (requalified) — leucine--tRNA ligase leuS octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv1075c (family_assigned) — SGNH/GDSL hydrolase family protein Rv1075c Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 mazE7 (requalified) — antitoxin MazE7 mazE7 mazE9 (requalified) — antitoxin MazE9 mazE9 cobG (requalified) — precorrin-3B synthase cobG cobH (requalified) — precorrin-8X methylmutase cobH cobIJ (requalified) — precorrin-2 C(20)-methyltransferase cobIJ mazF1 (requalified) — toxin MazF1 mazF1 vapC2 (family_assigned) — PIN domain nuclease vapC2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 vapC15 (family_assigned) — PIN domain nuclease vapC15 vapC41 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC41 Rv2600 (family_assigned) — integral membrane protein Rv2600 speE (requalified) — spermidine synthase speE vapC17 (family_assigned) — PIN domain-containing protein vapC17 Rv0229c (family_assigned) — PIN domain nuclease Rv0229c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.