MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1952 · 46 genes shown · anchor vapC14 · open gene page → · ← back to 1 hop

Evidence: Min score 0
vapB14 (requalified) — antitoxin vapB14 vapC14 (requalified) — ribonuclease VapC14 vapC14 Rv1950c (dark) — hypothetical protein Rv1950c Rv1949c (dark) — Conserved hypothetical protein Rv1949c Rv1951c (dark) — hypothetical protein Rv1951c Rv1948c (family_assigned) — hypothetical protein Rv1948c vapC4 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC4 vapC8 (family_assigned) — PIN domain-containing protein vapC8 vapC5 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC5 vapC10 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC10 vapC2 (family_assigned) — PIN domain nuclease vapC2 vapC17 (family_assigned) — PIN domain-containing protein vapC17 vapC21 (requalified) — type II toxin-antitoxin system toxin ribonuclease vapC21 vapB4 (requalified) — type II toxin-antitoxin system antitoxin VapB4 vapB4 vapB5 (family_assigned) — type II toxin-antitoxin system Phd/YefM family ant vapB5 octT (requalified) — diglucosylglycerate octanoyltransferase octT Rv1075c (family_assigned) — SGNH/GDSL hydrolase family protein Rv1075c Rv0518 (family_assigned) — SGNH/GDSL hydrolase family protein Rv0518 leuS (requalified) — leucine--tRNA ligase leuS vapC31 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC31 Rv0597c (family_assigned) — ATP-binding protein Rv0597c Rv3479 (requalified) — transmembrane protein Rv3479 vapC48 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC48 vapB8 (requalified) — antitoxin VapB8 vapB8 Rv0666 (dark) — hypothetical protein Rv0666 atsD (requalified) — arylsulfatase AtsD atsD vapB47 (requalified) — antitoxin VapB47 vapB47 vapC46 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC46 Rv0625c (family_assigned) — TVP38/TMEM64 family protein Rv0625c vapC47 (family_assigned) — type II toxin-antitoxin system VapC family toxin vapC47 Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c vapB10 (family_assigned) — CopG family transcriptional regulator vapB10 nlhH (family_assigned) — alpha/beta hydrolase nlhH lipI (family_assigned) — alpha/beta hydrolase lipI Rv0611c (family_assigned) — DUF4926 domain-containing protein Rv0611c vapC20 (requalified) — type II toxin-antitoxin system toxin 23S rRNA-spec vapC20 PE_PGRS25 (family_assigned) — PE-PGRS family protein PE_PGRS25 PE_PGRS25 vapB2 (requalified) — type II toxin-antitoxin system antitoxin VapB2 vapB2 Rv0299 (requalified) — toxin-antitoxin system toxin Rv0299 Rv0298 (family_assigned) — ribbon-helix-helix protein%2C CopG family Rv0298 Rv0302 (family_assigned) — TetR/AcrR family transcriptional regulator Rv0302 Rv0303 (requalified) — protochlorophyllide reductase Rv0303 PE_PGRS5 (family_assigned) — PE-PGRS family protein PE_PGRS5 PE_PGRS5 vapB17 (family_assigned) — type II toxin-antitoxin system VapB family antitox vapB17 vapB41 (requalified) — antitoxin VapB41 vapB41 glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.