MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1934c · 42 genes shown · anchor echA13 · open gene page → · ← back to 1 hop

Evidence: Min score 0
fadE17 (requalified) — acyl-CoA dehydrogenase fadE17 echA13 (requalified) — enoyl-CoA hydratase echA13 fadE18 (family_assigned) — acyl-CoA dehydrogenase family protein fadE18 fadE33 (family_assigned) — acyl-CoA dehydrogenase family protein fadE33 mce3A (family_assigned) — Mce family protein Mce3A mce3A yrbE3B (family_assigned) — ABC transporter permease yrbE3B fadB (requalified) — fatty oxidation protein FadB fadB fadE32 (family_assigned) — acyl-CoA dehydrogenase family protein fadE32 mce3C (family_assigned) — virulence factor Mce family protein mce3C fixA (family_assigned) — electron transfer flavoprotein subunit beta/FixA f fixA mce3D (family_assigned) — virulence factor Mce family protein mce3D fixB (family_assigned) — electron transfer flavoprotein subunit alpha/FixB fixB Rv1937 (requalified) — FAD-binding oxidoreductase Rv1937 Rv1936 (requalified) — LLM class flavin-dependent oxidoreductase Rv1936 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE13 (family_assigned) — acyl-CoA dehydrogenase family protein fadE13 fadE30 (family_assigned) — acyl-CoA dehydrogenase family protein fadE30 fadE31 (family_assigned) — acyl-CoA dehydrogenase family protein fadE31 aspB (requalified) — pyridoxal phosphate-dependent aminotransferase aspB fadD3 (requalified) — 3-((3aS%2C4S%2C7aS)-7a-methyl-1%2C5-dioxo-octahydr fadD3 Rv3559c (family_assigned) — SDR family oxidoreductase Rv3559c yrbE3A (family_assigned) — ABC transporter permease yrbE3A lprM (family_assigned) — Mce family lipoprotein LprM lprM mce3F (family_assigned) — MlaD family protein mce3F mce3B (family_assigned) — virulence factor Mce family protein mce3B fadA (requalified) — acetyl-CoA C-acetyltransferase fadA fadA2 (requalified) — acetyl-CoA C-acetyltransferase fadA2 fadA4 (requalified) — acetyl-CoA acetyltransferase fadA4 fadA6 (requalified) — acetyl-CoA C-acetyltransferase fadA6 Rv1867 (requalified) — acetyl-CoA acetyltransferase Rv1867 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 Rv1972 (requalified) — Mce associated membrane protein Rv1972 fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fadE25 (requalified) — acyl-CoA dehydrogenase fadE25 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 fadE20 (family_assigned) — acyl-CoA dehydrogenase family protein fadE20 fprB (requalified) — FAD-dependent oxidoreductase fprB fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA gltD (family_assigned) — glutamate synthase subunit beta gltD ephB (requalified) — epoxide hydrolase EphB ephB ribA1 (requalified) — riboflavin biosynthesis protein RibA ribA1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.