MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1921c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppF (requalified) — haloacid dehalogenase-like hydrolase lppF Rv1443c (family_assigned) — hypothetical protein Rv1443c Rv3594 (requalified) — N-acetylmuramoyl-L-alanine amidase Rv3594 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv1288 (requalified) — esterase Rv1288 hisF (family_assigned) — imidazole glycerol phosphate synthase subunit HisF hisF Rv2319c (requalified) — universal stress protein Rv2319c hisH (family_assigned) — imidazole glycerol phosphate synthase subunit HisH hisH eccE1 (family_assigned) — type VII secretion system ESX-1 subunit EccE1 eccE1 PPE42 (family_assigned) — PPE family protein PPE42 PPE42 hisA (requalified) — bifunctional 1-(5-phosphoribosyl)-5-((5-phosphorib hisA Rv1682 (family_assigned) — hypothetical protein Rv1682 hisI (requalified) — phosphoribosyl-AMP cyclohydrolase hisI Rv1754c (requalified) — DUF4185 domain-containing protein Rv1754c lprI (family_assigned) — MliC family protein lprI espK (family_assigned) — ESX-1 secretion-associated protein EspK espK Rv1230c (family_assigned) — lytic transglycosylase domain-containing protein Rv1230c eccD1 (family_assigned) — type VII secretion system ESX-1 subunit EccD1 eccD1 Rv2687c (family_assigned) — fluoroquinolone transporter permease Rv2687c Rv2686c (family_assigned) — fluoroquinolones efflux ABC transporter permease Rv2686c rsmA (requalified) — anti-sigma-M factor RsmA rsmA Rv0210 (family_assigned) — hypothetical protein Rv0210 pks4 (requalified) — polyketide beta-ketoacyl synthase pks4 Rv3604c (dark) — DUF6779 domain-containing protein Rv3604c Rv1287 (family_assigned) — RrF2 family transcriptional regulator Rv1287 Rv1289 (family_assigned) — hypothetical protein Rv1289 Rv0097 (family_assigned) — TauD/TfdA family dioxygenase Rv0097 hisB (requalified) — imidazoleglycerol-phosphate dehydratase HisB hisB hisD (requalified) — histidinol dehydrogenase hisD hisC1 (requalified) — histidinol-phosphate aminotransferase hisC1 rocE (requalified) — amino acid permease rocE Rv2323c (family_assigned) — hypothetical protein Rv2323c rocD1 (family_assigned) — Probable ornithine aminotransferase (N-terminus pa rocD1 rocD2 (family_assigned) — Probable ornithine aminotransferase (C-terminus pa rocD2 Rv2324 (family_assigned) — Lrp/AsnC family transcriptional regulator Rv2324 mycP1 (requalified) — type VII secretion system ESX-1 serine protease my mycP1 eccB1 (family_assigned) — type VII secretion system ESX-1 subunit EccB1 eccB1 eccCa1 (family_assigned) — type VII secretion system ESX-1 FtsK/SpoIIIE famil eccCa1 espB (requalified) — type VII secretion system ESX-1 target EspB espB Rv2209 (requalified) — MFS transporter Rv2209 Rv1004c (family_assigned) — hypothetical protein Rv1004c PE_PGRS30 (family_assigned) — PE-PGRS family protein PE_PGRS30 PE_PGRS30 PE_PGRS28 (family_assigned) — PE-PGRS family protein PE_PGRS28 PE_PGRS28 PE_PGRS15 (family_assigned) — PE-PGRS family protein PE_PGRS15 PE_PGRS15 PE_PGRS43 (family_assigned) — PE-PGRS family protein PE_PGRS43 PE_PGRS43 Rv1733c (family_assigned) — hypothetical protein Rv1733c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.