MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1913 · 46 genes shown · anchor fadB5 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1913 (requalified) — MBL fold metallo-hydrolase Rv1913 fadB5 (family_assigned) — medium chain dehydrogenase/reductase family protei fadB5 Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 Rv3071 (family_assigned) — DUF190 domain-containing protein Rv3071 lppC (family_assigned) — YbhB/YbcL family Raf kinase inhibitor-like protein lppC echA3 (family_assigned) — crotonase/enoyl-CoA hydratase family protein echA3 Rv1929c (family_assigned) — TIGR03085 family metal-binding protein Rv1929c Rv0441c (family_assigned) — pyridoxamine 5'-phosphate oxidase family protein Rv0441c Rv2367c (requalified) — endoribonuclease Rv2367c truA (requalified) — tRNA pseudouridine synthase A truA pks1 (requalified) — polyketide synthase pks1 mbtC (requalified) — polyketide synthetase MbtC mbtC pks17 (requalified) — polyketide synthase pks17 pks3 (requalified) — polyketide beta-ketoacyl synthase pks3 pks15 (requalified) — polyketide synthase pks15 pks9 (requalified) — type I polyketide synthase pks9 pks6 (requalified) — membrane bound polyketide synthase pks6 sirA (requalified) — sulfite reductase sirA metZ (requalified) — O-succinylhomoserine sulfhydrylase metZ metB (requalified) — cystathionine gamma-synthase metB Rv3684 (requalified) — lyase Rv3684 cysK1 (requalified) — O-acetylserine sulfhydrylase cysK1 aao (requalified) — FAD-dependent oxidoreductase aao crcB (requalified) — fluoride efflux transporter CrcB crcB crcB (requalified) — fluoride efflux transporter CrcB crcB rsdA (requalified) — anti-sigma D factor RsdA rsdA pgmA (requalified) — phosphoglucomutase (alpha-D-glucose-1%2C6-bisphosp pgmA Rv0210 (family_assigned) — hypothetical protein Rv0210 rplP (requalified) — 50S ribosomal protein L16 rplP rplB (requalified) — 50S ribosomal protein L2 rplB rpsB (requalified) — 30S ribosomal protein S2 rpsB rplM (requalified) — 50S ribosomal protein L13 rplM rpsE (requalified) — 30S ribosomal protein S5 rpsE rpsO (requalified) — 30S ribosomal protein S15 rpsO fadE2 (requalified) — acyl-CoA dehydrogenase fadE2 fadE7 (requalified) — acyl-CoA dehydrogenase fadE7 fadE23 (family_assigned) — acyl-CoA dehydrogenase family protein fadE23 fadE1 (requalified) — acyl-CoA dehydrogenase FadE1 fadE1 fadE19 (family_assigned) — acyl-CoA dehydrogenase family protein fadE19 fadE4 (family_assigned) — acyl-CoA dehydrogenase family protein fadE4 tuf (requalified) — elongation factor Tu tuf Rv1930c (requalified) — glutamine amidotransferase Rv1930c gltB (family_assigned) — glutamate synthase large subunit gltB qcrC (requalified) — cytochrome c qcrC Rv1931c (family_assigned) — transcriptional regulator Rv1931c Rv1928c (family_assigned) — SDR family oxidoreductase Rv1928c

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.