MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1906c · 46 genes shown · anchor aao · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1906c (family_assigned) — hypothetical protein Rv1906c aao (requalified) — FAD-dependent oxidoreductase aao Rv0941c (family_assigned) — STAS domain-containing protein Rv0941c Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c ptrp (family_assigned) — hypothetical protein ptrp Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 pirG (requalified) — exported repetitive protein pirG Rv2015c (requalified) — HNH endonuclease signature motif containing protei Rv2015c Rv0479c (family_assigned) — DUF2993 domain-containing protein Rv0479c Rv2743c (family_assigned) — hypothetical protein Rv2743c Rv1765c (family_assigned) — hypothetical protein Rv1765c Rv1836c (family_assigned) — substrate-binding domain-containing protein Rv1836c chiZ (requalified) — cell wall hydrolase ChiZ chiZ gcvB (requalified) — aminomethyl-transferring glycine dehydrogenase gcvB glyA2 (requalified) — serine hydroxymethyltransferase glyA2 glyA1 (requalified) — serine hydroxymethyltransferase glyA1 Rv1059 (requalified) — dihydrodipicolinate reductase Rv1059 Rv0926c (requalified) — diacylglycerol kinase Rv0926c Rv0331 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0331 Rv0940c (family_assigned) — TIGR03619 family F420-dependent LLM class oxidored Rv0940c Rv3351c (family_assigned) — hypothetical protein Rv3351c Rv1203c (family_assigned) — hypothetical protein Rv1203c Rv0312 (family_assigned) — Hsp70 family protein Rv0312 ripA (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipA ripA mtc28 (family_assigned) — LpqN/LpqT family lipoprotein mtc28 Rv1157c (dark) — hypothetical protein Rv1157c ripB (family_assigned) — NlpC/P60 family peptidoglycan endopeptidase RipB ripB Rv0539 (requalified) — dolichyl-phosphate sugar synthase Rv0539 Rv0540 (family_assigned) — DUF2064 domain-containing protein Rv0540 cpnT (requalified) — outer membrane channel protein/necrotizing toxin g cpnT Rv2164c (family_assigned) — hypothetical protein Rv2164c Rv1775 (family_assigned) — hypothetical protein Rv1775 Rv3909 (dark) — hypothetical protein Rv3909 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW Rv1752 (family_assigned) — hypothetical protein Rv1752 Rv1354c (requalified) — bifunctional diguanylate cyclase/phosphodiesterase Rv1354c Rv2079 (family_assigned) — alpha/beta hydrolase Rv2079 Rv2423 (requalified) — class I SAM-dependent methyltransferase Rv2423 fbpC (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpC Rv1158c (dark) — hypothetical protein Rv1158c Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv2100 (family_assigned) — hypothetical protein Rv2100 Rv0393 (family_assigned) — hypothetical protein Rv0393

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.