MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1902c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
nanT (family_assigned) — sialate:H+ symport family MFS transporter nanT Rv1903 (family_assigned) — phage holin family protein Rv1903 Rv1191 (family_assigned) — alpha/beta hydrolase Rv1191 lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ Rv1672c (requalified) — MFS transporter Rv1672c trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 nicT (family_assigned) — HoxN/HupN/NixA family nickel/cobalt transporter nicT Rv1904 (requalified) — anti-sigma factor antagonist Rv1904 Rv1634 (requalified) — MFS transporter Rv1634 ansP1 (requalified) — L-asparagine permease ansP1 ansP2 (requalified) — L-asparagine permease ansP2 Rv1410c (requalified) — aminoglycoside/tetracycline transporter Rv1410c Rv1272c (family_assigned) — fatty acid ABC transporter ATP-binding protein/per Rv1272c Rv0944 (requalified) — formamidopyrimidine-DNA glycosylase Rv0944 Rv0945 (requalified) — oxidoreductase Rv0945 arcA (requalified) — arginine deiminase arcA fadB5 (family_assigned) — medium chain dehydrogenase/reductase family protei fadB5 Rv1192 (family_assigned) — alpha/beta hydrolase Rv1192 fadD36 (requalified) — acyl-CoA synthetase fadD36 Rv1190 (requalified) — alpha/beta fold hydrolase Rv1190 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 sigI (requalified) — RNA polymerase sigma factor SigI sigI Rv1874 (family_assigned) — hypothetical protein Rv1874 lppD (requalified) — lipoprotein LppD lppD cinA (requalified) — competence/damage-inducible protein A cinA Rv1363c (dark) — hypothetical protein Rv1363c Rv1359 (family_assigned) — transcriptional regulator Rv1359 pks12 (requalified) — type I polyketide synthase pks12 omamA (requalified) — hypothetical protein omamA Rv1673c (family_assigned) — transglutaminase family protein Rv1673c Rv1674c (family_assigned) — metalloregulator ArsR/SmtB family transcription fa Rv1674c sugI (requalified) — sugar-transport integral membrane protein SugI sugI glpK (requalified) — glycerol kinase GlpK glpK trxC (requalified) — thioredoxin trxC trxB1 (requalified) — thioredoxin trxB1 csd (requalified) — cysteine desulfurase csd ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1324 (requalified) — co-chaperone YbbN Rv1324 trxA (family_assigned) — thioredoxin family protein trxA mtr (requalified) — mycothione reductase mtr Rv2854 (family_assigned) — alpha/beta hydrolase Rv2854 plcC (requalified) — phospholipase C plcC plcA (requalified) — membrane-associated phospholipase A plcA plcB (requalified) — membrane-associated phospholipase B plcB Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c rsbW (requalified) — anti-sigma B factor RsbW rsbW

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.