MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1900c · 46 genes shown · anchor lppD · open gene page → · ← back to 1 hop

Evidence: Min score 0
lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ lppD (requalified) — lipoprotein LppD lppD cinA (requalified) — competence/damage-inducible protein A cinA Rv1363c (dark) — hypothetical protein Rv1363c Rv1359 (family_assigned) — transcriptional regulator Rv1359 pks12 (requalified) — type I polyketide synthase pks12 omamA (requalified) — hypothetical protein omamA Rv3492c (requalified) — Mce associated protein Rv3492c omamB (requalified) — hypothetical protein omamB Rv0178 (requalified) — Mce associated membrane protein Rv0178 Rv1972 (requalified) — Mce associated membrane protein Rv1972 Rv2390c (family_assigned) — hypothetical protein Rv2390c Rv1362c (family_assigned) — hypothetical protein Rv1362c cobB (requalified) — NAD-dependent protein deacylase cobB Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c Rv0143c (requalified) — chloride channel protein Rv0143c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC nudC (requalified) — NAD(+) diphosphatase nudC Rv1973 (family_assigned) — hypothetical protein Rv1973 mce1D (family_assigned) — virulence factor Mce family protein mce1D mce1A (family_assigned) — Mce family protein Mce1A mce1A mce2F (family_assigned) — MlaD family protein mce2F Rv1358 (family_assigned) — LuxR C-terminal-related transcriptional regulator Rv1358 cmr (family_assigned) — HTH-type transcriptional regulator Cmr cmr Rv0894 (family_assigned) — hypothetical protein Rv0894 Rv3830c (family_assigned) — TetR/AcrR family transcriptional regulator Rv3830c Rv3263 (requalified) — class I SAM-dependent methyltransferase Rv3263 Rv3840 (family_assigned) — transcriptional regulator Rv3840 fas (requalified) — fatty acid synthase fas fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC mas (requalified) — mycocerosate synthase mas pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 mce4D (family_assigned) — virulence factor Mce family protein mce4D lprN (family_assigned) — Mce family lipoprotein LprN lprN mce4F (family_assigned) — virulence factor Mce family protein mce4F Rv3493c (requalified) — mammalian cell entry protein Rv3493c mce4A (family_assigned) — Mce family protein Mce4A mce4A mce4C (family_assigned) — virulence factor Mce family protein mce4C

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.