MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1899c · 46 genes shown · anchor lipJ · open gene page → · ← back to 1 hop

Evidence: Min score 0
lppD (requalified) — lipoprotein LppD lppD lipJ (family_assigned) — adenylate/guanylate cyclase domain-containing prot lipJ cobB (requalified) — NAD-dependent protein deacylase cobB cinA (requalified) — competence/damage-inducible protein A cinA Rv2972c (family_assigned) — HNH endonuclease family protein Rv2972c Rv0143c (requalified) — chloride channel protein Rv0143c Rv3433c (requalified) — NAD(P)H-hydrate dehydratase Rv3433c lppK (family_assigned) — hypothetical protein lppK cpdA (requalified) — 3'%2C5'-cyclic adenosine monophosphate phosphodies cpdA lpqG (family_assigned) — SIMPL domain-containing protein lpqG galTb (family_assigned) — Probable galactose-1-phosphate uridylyltransferase galTb lpqD (family_assigned) — histidine phosphatase family protein lpqD lppJ (family_assigned) — hypothetical protein lppJ Rv1363c (dark) — hypothetical protein Rv1363c Rv1359 (family_assigned) — transcriptional regulator Rv1359 pks12 (requalified) — type I polyketide synthase pks12 omamA (requalified) — hypothetical protein omamA nadR (requalified) — nicotinamide-nucleotide adenylyltransferase nadR nadE (requalified) — NAD(+) synthase nadE Rv1152 (family_assigned) — GntR family transcriptional regulator Rv1152 pncA (requalified) — pyrazinamidase PncA pncA nadD (requalified) — nicotinate-nucleotide adenylyltransferase nadD sthA (requalified) — Si-specific NAD(P)(+) transhydrogenase sthA pncB1 (requalified) — nicotinate phosphoribosyltransferase pncB1 pncB2 (requalified) — nicotinate phosphoribosyltransferase pncB2 nadC (requalified) — carboxylating nicotinate-nucleotide diphosphorylas nadC nudC (requalified) — NAD(+) diphosphatase nudC recG (requalified) — ATP-dependent DNA helicase RecG recG Rv2974c (family_assigned) — hypothetical protein Rv2974c Rv2975c (family_assigned) — hypothetical protein Rv2975c rnpA (requalified) — ribonuclease P protein component rnpA rhlE (requalified) — DEAD/DEAH box helicase rhlE deaD (requalified) — DEAD/DEAH box helicase deaD Rv0144 (family_assigned) — transcriptional regulator Rv0144 Rv1762c (family_assigned) — heavy metal-binding domain-containing protein Rv1762c helZ (requalified) — DEAD/DEAH box helicase helZ gadB (requalified) — glutamate decarboxylase gadB Rv0145 (requalified) — class I SAM-dependent methyltransferase Rv0145 Rv0146 (requalified) — class I SAM-dependent methyltransferase Rv0146 Rv1700 (requalified) — ADP-ribose diphosphatase Rv1700 Rv3672c (requalified) — CoA pyrophosphatase Rv3672c Rv2609c (family_assigned) — NUDIX domain-containing protein Rv2609c polA (requalified) — DNA polymerase I polA Rv2090 (requalified) — 5'-3' exonuclease Rv2090 dnaA (requalified) — chromosomal replication initiator protein DnaA dnaA ligC (requalified) — ATP-dependent DNA ligase ligC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.