MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1896c · 24 genes shown · anchor dtd · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c dtd (requalified) — D-aminoacyl-tRNA deacylase dtd Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 Rv1898 (family_assigned) — MTH1187 family thiamine-binding protein Rv1898 cpsA (family_assigned) — LCP family protein cpsA Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c relA (family_assigned) — RelA/SpoT family protein relA Rv3013 (family_assigned) — amino acid-binding protein Rv3013 rplD (requalified) — 50S ribosomal protein L4 rplD Rv2750 (family_assigned) — Rv2750 family mycofactocin-dependent SDR oxidoredu Rv2750 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv3767c (requalified) — class I SAM-dependent methyltransferase Rv3767c Rv0893c (requalified) — class I SAM-dependent methyltransferase Rv0893c Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 ribG (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribG ribD (requalified) — bifunctional diaminohydroxyphosphoribosylaminopyri ribD Rv2672 (requalified) — alpha/beta fold hydrolase Rv2672 Rv0552 (requalified) — amidohydrolase Rv0552 Rv3896c (requalified) — transglycosylase Rv3896c rsdA (requalified) — anti-sigma D factor RsdA rsdA Rv3483c (family_assigned) — LppP/LprE family lipoprotein Rv3483c Rv0090 (dark) — DUF2127 domain-containing protein Rv0090 Rv3482c (dark) — DUF2510 domain-containing protein Rv3482c Rv1006 (family_assigned) — hypothetical protein Rv1006

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.