MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1894c · 37 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1894c (family_assigned) — nitronate monooxygenase family protein Rv1894c fas (requalified) — fatty acid synthase fas mas (requalified) — mycocerosate synthase mas ppsC (requalified) — phthiocerol type I polyketide synthase PpsC ppsC pks5 (requalified) — sulfolipid-1 biosynthesis phthioceranic/hydroxypht pks5 pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks12 (requalified) — type I polyketide synthase pks12 kasB (requalified) — 3-oxoacyl-ACP synthase 2 kasB kasA (requalified) — 3-oxoacyl-ACP synthase KasA kasA pks13 (requalified) — polyketide synthase Pks13 pks13 fabD (requalified) — malonyl CoA-acyl carrier protein transacylase fabD pks1 (requalified) — polyketide synthase pks1 ltp4 (family_assigned) — thiolase domain-containing protein ltp4 pks7 (requalified) — type I polyketide synthase pks7 pks17 (requalified) — polyketide synthase pks17 accD3 (family_assigned) — carboxyl transferase domain-containing protein accD3 pks6 (requalified) — membrane bound polyketide synthase pks6 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ppsE (requalified) — phthiocerol type I polyketide synthase PpsE ppsE ppsD (requalified) — phthiocerol type I polyketide synthase PpsD ppsD ppsB (requalified) — phthiocerol type I polyketide synthase PpsB ppsB papA1 (requalified) — acyltransferase PapA1 papA1 accD6 (family_assigned) — acyl-CoA carboxylase subunit beta accD6 acpM (requalified) — meromycolate extension acyl carrier protein AcpM acpM fabH (requalified) — beta-ketoacyl-ACP synthase III fabH mbtH (requalified) — mycobactin NRPS accessory protein MbtH mbtH nrp (requalified) — non-ribosomal peptide synthetase Nrp nrp fadD32 (requalified) — long-chain-fatty-acid--AMP ligase FadD32 fadD32 accD4 (family_assigned) — acyl-CoA carboxylase subunit beta accD4 pks15 (requalified) — polyketide synthase pks15 mbtC (requalified) — polyketide synthetase MbtC mbtC Rv3521 (family_assigned) — hypothetical protein Rv3521 fadB (requalified) — fatty oxidation protein FadB fadB chsH2 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH2 ltp3 (family_assigned) — thiolase domain-containing protein ltp3 echA20 (family_assigned) — enoyl-CoA hydratase family protein echA20 chsH1 (family_assigned) — 3-oxo-23%2C24-bisnorchol-4%2C17(20)-dien-22-oyl-Co chsH1

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.