MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1890c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1890c (family_assigned) — hypothetical protein Rv1890c Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv1889c (family_assigned) — Conserved hypothetical protein Rv1889c Rv1891 (dark) — hypothetical protein Rv1891 Rv0756c (family_assigned) — hypothetical protein Rv0756c Rv1888c (family_assigned) — Possible transmembrane protein Rv1888c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv1945 (requalified) — HNH endonuclease signature motif containing protei Rv1945 Rv1892 (family_assigned) — hypothetical protein Rv1892 Rv1893 (family_assigned) — hypothetical protein Rv1893 Rv1888A (family_assigned) — Conserved hypothetical protein Rv1888A Rv1702c (requalified) — HNH endonuclease signature motif containing protei Rv1702c lmeA (requalified) — mannan chain length control protein LmeA lmeA Rv3802c (requalified) — phospholipase Rv3802c aftC (requalified) — arabinofuranan 3-O-arabinosyltransferase aftC Rv1780 (family_assigned) — hypothetical protein Rv1780 Rv1476 (family_assigned) — DUF6676 family protein Rv1476 Rv3850 (family_assigned) — DUF6474 family protein Rv3850 aftB (requalified) — terminal beta-(1->2)-arabinofuranosyltransferase aftB Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv0128 (family_assigned) — YoaK family protein Rv0128 phoP (requalified) — two-component system response regulator PhoP phoP phoR (requalified) — sensory box histidine kinase PhoR phoR Rv1125 (family_assigned) — WS/DGAT domain-containing protein Rv1125 lprB (family_assigned) — DUF3558 domain-containing protein lprB Rv3906c (requalified) — pullulanase Rv3906c ttfA (requalified) — trehalose monomycolate transport factor TtfA ttfA Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv2557 (family_assigned) — hypothetical protein Rv2557 Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 pgk (requalified) — phosphoglycerate kinase pgk eno (requalified) — phosphopyruvate hydratase eno serA2 (requalified) — D-3-phosphoglycerate dehydrogenase SerA serA2 fba (requalified) — class II fructose-bisphosphate aldolase fba pgi (requalified) — glucose-6-phosphate isomerase pgi serA1 (requalified) — D-3-phosphoglycerate dehydrogenase serA1 Rv1148c (family_assigned) — hypothetical protein Rv1148c Rv0515 (family_assigned) — hypothetical protein Rv0515 Rv0336 (family_assigned) — hypothetical protein Rv0336 Rv0393 (family_assigned) — hypothetical protein Rv0393 Rv3776 (family_assigned) — hypothetical protein Rv3776 Rv2100 (family_assigned) — hypothetical protein Rv2100 pptT (requalified) — 4'-phosphopantetheinyl transferase pptT

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.