MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1889c · 42 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1889c (family_assigned) — Conserved hypothetical protein Rv1889c Rv1888A (family_assigned) — Conserved hypothetical protein Rv1888A Rv1890c (family_assigned) — hypothetical protein Rv1890c Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1891 (dark) — hypothetical protein Rv1891 Rv0128 (family_assigned) — YoaK family protein Rv0128 fadD9 (requalified) — carboxylic acid reductase fadD9 Rv1892 (family_assigned) — hypothetical protein Rv1892 eccB3 (family_assigned) — type VII secretion system ESX-3 subunit EccB3 eccB3 Rv1893 (family_assigned) — hypothetical protein Rv1893 pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv1888c (family_assigned) — Possible transmembrane protein Rv1888c Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv0756c (family_assigned) — hypothetical protein Rv0756c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv2750 (family_assigned) — Rv2750 family mycofactocin-dependent SDR oxidoredu Rv2750 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c Rv3767c (requalified) — class I SAM-dependent methyltransferase Rv3767c Rv0893c (requalified) — class I SAM-dependent methyltransferase Rv0893c Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 eccC3 (family_assigned) — type VII secretion system ESX-3 FtsK/SpoIIIE famil eccC3 eccE3 (family_assigned) — type VII secretion system ESX-3 subunit EccE3 eccE3 mycP3 (requalified) — type VII secretion system ESX-3 serine protease my mycP3 espG3 (requalified) — type VII secretion system ESX-3 associated protein espG3 eccB5 (family_assigned) — type VII secretion system ESX-5 subunit EccB5 eccB5 mak (requalified) — maltokinase mak treS (requalified) — maltose alpha-D-glucosyltransferase treS Rv0204c (family_assigned) — TIGR00374 family protein Rv0204c papA2 (requalified) — trehalose-2-sulfate acyltransferase papA2 papA1 (requalified) — acyltransferase PapA1 papA1 papA3 (requalified) — acyltransferase PapA3 papA3 pks13 (requalified) — polyketide synthase Pks13 pks13 mbtB (requalified) — phenyloxazoline synthase MbtB mbtB pks2 (requalified) — phthioceranic/hydroxyphthioceranic acid synthase pks2 pks1 (requalified) — polyketide synthase pks1 mas (requalified) — mycocerosate synthase mas pks12 (requalified) — type I polyketide synthase pks12 eccA3 (requalified) — ESX-3 secretion system protein EccA eccA3 PPE4 (family_assigned) — PPE family protein PPE4 PPE4

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.