MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1888c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1888c (family_assigned) — Possible transmembrane protein Rv1888c Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv1890c (family_assigned) — hypothetical protein Rv1890c Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv2557 (family_assigned) — hypothetical protein Rv2557 Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738 Rv2632c (family_assigned) — DUF1876 domain-containing protein Rv2632c Rv1888A (family_assigned) — Conserved hypothetical protein Rv1888A mrp (family_assigned) — Mrp/NBP35 family ATP-binding protein mrp dxs2 (requalified) — 1-deoxy-D-xylulose-5-phosphate synthase dxs2 gcvT (requalified) — aminomethyltransferase gcvT ispE (requalified) — 4-diphosphocytidyl-2C-methyl-D-erythritol kinase ispE cut2 (family_assigned) — cutinase family protein cut2 Rv2551c (family_assigned) — A24 family peptidase Rv2551c Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv1889c (family_assigned) — Conserved hypothetical protein Rv1889c Rv1891 (dark) — hypothetical protein Rv1891 Rv0756c (family_assigned) — hypothetical protein Rv0756c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv2160c (family_assigned) — Conserved hypothetical protein Rv2160c Rv2160A (family_assigned) — Conserved hypothetical protein Rv2160A Rv2721c (family_assigned) — LGFP repeat-containing protein Rv2721c Rv3481c (family_assigned) — GAP family protein Rv3481c Rv2556c (requalified) — secondary thiamine-phosphate synthase enzyme YjbQ Rv2556c devS (requalified) — two-component system sensor histidine kinase DevS devS devR (requalified) — two-component system response regulator DevR devR nrdZ (requalified) — adenosylcobalamin-dependent ribonucleoside-diphosp nrdZ Rv2005c (requalified) — universal stress protein Rv2005c narX (family_assigned) — respiratory nitrate reductase subunit gamma narX cyp135B1 (requalified) — cytochrome P450 cyp135B1 Rv3127 (requalified) — NAD(P)H nitroreductase Rv3127 Rv3131 (requalified) — NAD(P)H nitroreductase Rv3131 hspX (requalified) — alpha-crystallin HspX hspX Rv1996 (requalified) — universal stress protein Rv1996 acg (family_assigned) — FMN-binding protein Acg acg Rv3134c (requalified) — universal stress protein Rv3134c Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv1366 (family_assigned) — GTP pyrophosphokinase family protein Rv1366 dosT (requalified) — two-component system sensor histidine kinase DosT dosT Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 nuoD (family_assigned) — NADH dehydrogenase (quinone) subunit D nuoD nuoI (family_assigned) — NADH-quinone oxidoreductase subunit NuoI nuoI nuoB (family_assigned) — NADH-quinone oxidoreductase subunit B nuoB

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.