MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1888A · 36 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1888A (family_assigned) — Conserved hypothetical protein Rv1888A Rv1889c (family_assigned) — Conserved hypothetical protein Rv1889c Rv2751 (requalified) — class I SAM-dependent methyltransferase Rv2751 pptT (requalified) — 4'-phosphopantetheinyl transferase pptT Rv1890c (family_assigned) — hypothetical protein Rv1890c Rv1747 (family_assigned) — ATP-binding cassette domain-containing protein Rv1747 Rv1888c (family_assigned) — Possible transmembrane protein Rv1888c eccD3 (family_assigned) — type VII secretion system ESX-3 subunit EccD3 eccD3 Rv1891 (dark) — hypothetical protein Rv1891 Rv0128 (family_assigned) — YoaK family protein Rv0128 Rv2750 (family_assigned) — Rv2750 family mycofactocin-dependent SDR oxidoredu Rv2750 Rv2749 (family_assigned) — putative quinol monooxygenase Rv2749 Rv1896c (requalified) — class I SAM-dependent methyltransferase Rv1896c Rv3767c (requalified) — class I SAM-dependent methyltransferase Rv3767c Rv0893c (requalified) — class I SAM-dependent methyltransferase Rv0893c Rv0281 (requalified) — class I SAM-dependent methyltransferase Rv0281 Rv2795c (requalified) — metallophosphoesterase Rv2795c truB (requalified) — tRNA pseudouridine(55) synthase TruB truB mbtB (requalified) — phenyloxazoline synthase MbtB mbtB ltp1 (requalified) — lipid-transfer protein ltp1 pks13 (requalified) — polyketide synthase Pks13 pks13 fadE21 (family_assigned) — acyl-CoA dehydrogenase family protein fadE21 Rv2342 (family_assigned) — hypothetical protein Rv2342 Rv0756c (family_assigned) — hypothetical protein Rv0756c gpm1 (requalified) — 2,3-bisphosphoglycerate-dependent phosphoglycerate gpm1 Rv1248c (family_assigned) — multifunctional oxoglutarate decarboxylase/oxoglut Rv1248c pknB (family_assigned) — Stk1 family PASTA domain-containing Ser/Thr kinase pknB pknF (requalified) — serine/threonine protein kinase PknF pknF Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c Rv1278 (family_assigned) — AAA family ATPase Rv1278 Rv1277 (family_assigned) — hypothetical protein Rv1277 Rv2302 (family_assigned) — DUF1918 domain-containing protein Rv2302 Rv2558 (family_assigned) — hypothetical protein Rv2558 Rv2557 (family_assigned) — hypothetical protein Rv2557 Rv0569 (family_assigned) — DUF1918 domain-containing protein Rv0569 Rv1738 (family_assigned) — DUF1876 domain-containing protein Rv1738

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.