MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1887 · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1887 (family_assigned) — hypothetical protein Rv1887 trpC (requalified) — indole-3-glycerol phosphate synthase TrpC trpC rplB (requalified) — 50S ribosomal protein L2 rplB Rv0544c (family_assigned) — hypothetical protein Rv0544c rplD (requalified) — 50S ribosomal protein L4 rplD zmp1 (requalified) — zinc metalloprotease Zmp1 zmp1 rpsA (requalified) — 30S ribosomal protein S1 rpsA rpfC (requalified) — resuscitation-promoting factor RpfC rpfC Rv1084 (family_assigned) — thioredoxin domain-containing protein Rv1084 fbpB (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpB Rv0175 (family_assigned) — hypothetical protein Rv0175 Rv1096 (family_assigned) — polysaccharide deacetylase family protein Rv1096 Rv3835 (family_assigned) — septum formation family protein Rv3835 trpA (family_assigned) — tryptophan synthase subunit alpha trpA trpB (family_assigned) — tryptophan synthase subunit beta trpB trpE (requalified) — anthranilate synthase component I trpE trpG (requalified) — anthranilate synthase component II trpG trpD (requalified) — anthranilate phosphoribosyltransferase trpD mbtI (requalified) — salicylate synthase mbtI rpsO (requalified) — 30S ribosomal protein S15 rpsO rplE (requalified) — 50S ribosomal protein L5 rplE rpmJ (requalified) — 50S ribosomal protein L36 rpmJ rpsQ (requalified) — 30S ribosomal protein S17 rpsQ rplX (requalified) — 50S ribosomal protein L24 rplX rpsE (requalified) — 30S ribosomal protein S5 rpsE pitA (requalified) — anion permease pitA Rv0543c (family_assigned) — DUF3349 domain-containing protein Rv0543c Rv0541c (family_assigned) — integral membrane protein Rv0541c Rv0547c (family_assigned) — SDR family oxidoreductase Rv0547c menE (requalified) — o-succinylbenzoate--CoA ligase menE rplC (requalified) — 50S ribosomal protein L3 rplC rpsP (requalified) — 30S ribosomal protein S16 rpsP rpmI (requalified) — 50S ribosomal protein L35 rpmI rpsM (requalified) — 30S ribosomal protein S13 rpsM rplN (requalified) — 50S ribosomal protein L14 rplN rpmC (requalified) — 50S ribosomal protein L29 rpmC omamA (requalified) — hypothetical protein omamA omamB (requalified) — hypothetical protein omamB polA (requalified) — DNA polymerase I polA ruvB (requalified) — Holliday junction branch migration DNA helicase Ru ruvB Rv3633 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv3633 Rv1501 (family_assigned) — phytanoyl-CoA dioxygenase family protein Rv1501 rpsH (requalified) — 30S ribosomal protein S8 rpsH rpsK (requalified) — 30S ribosomal protein S11 rpsK rpsL (requalified) — 30S ribosomal protein S12 rpsL rpsD (requalified) — 30S ribosomal protein S4 rpsD

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.