MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1879 · 45 genes shown · anchor glnA3 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1879 (family_assigned) — amidohydrolase family protein Rv1879 glnA3 (family_assigned) — glutamine synthetase family protein glnA3 glnA2 (family_assigned) — glutamine synthetase family protein glnA2 Rv1877 (family_assigned) — MDR family MFS transporter Rv1877 bfrA (requalified) — bacterioferritin BfrA bfrA glnA4 (family_assigned) — glutamine synthetase family protein glnA4 Rv1260 (family_assigned) — FAD-binding protein Rv1260 Rv1117 (family_assigned) — putative quinol monooxygenase Rv1117 glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 Rv1870c (family_assigned) — hypothetical protein Rv1870c Rv1841c (family_assigned) — hemolysin family protein Rv1841c Rv0072 (family_assigned) — FtsX-like permease family protein Rv0072 Rv1395 (family_assigned) — HTH-type transcriptional regulator Rv1395 gltB (family_assigned) — glutamate synthase large subunit gltB glmS (requalified) — glutamine--fructose-6-phosphate transaminase (isom glmS gltD (family_assigned) — glutamate synthase subunit beta gltD carA (family_assigned) — glutamine-hydrolyzing carbamoyl-phosphate synthase carA carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB purF (requalified) — amidophosphoribosyltransferase purF Rv1250 (requalified) — MFS transporter Rv1250 hemE (requalified) — uroporphyrinogen decarboxylase hemE mmpL2 (requalified) — RND transporter MmpL2 mmpL2 Rv1364c (family_assigned) — sigma factor regulatory protein Rv1364c mmcO (requalified) — multicopper oxidase MmcO mmcO bfrB (requalified) — ferritin BfrB bfrB hemZ (requalified) — ferrochelatase hemZ Rv2857c (requalified) — 3-oxoacyl-ACP reductase Rv2857c Rv2859c (requalified) — gamma-glutamyl-gamma-aminobutyrate hydrolase Rv2859c aldC (requalified) — aldehyde dehydrogenase AldC aldC udgB (requalified) — uracil DNA glycosylase udgB Rv1258c (requalified) — MFS transporter Rv1258c erg3 (requalified) — membrane-bound C-5 sterol desaturase erg3 Rv1257c (family_assigned) — FAD-linked oxidase C-terminal domain-containing pr Rv1257c cyp130 (requalified) — cytochrome P450 Cyp130 cyp130 Rv2260 (requalified) — MBL fold metallo-hydrolase Rv2260 Rv0360c (family_assigned) — hypothetical protein Rv0360c polA (requalified) — DNA polymerase I polA Rv1929c (family_assigned) — TIGR03085 family metal-binding protein Rv1929c Rv0088 (requalified) — polyketide cyclase/dehydrase Rv0088 rocA (requalified) — L-glutamate gamma-semialdehyde dehydrogenase rocA rho (requalified) — transcription termination factor Rho rho Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c coaE (requalified) — dephospho-CoA kinase coaE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA yidC (requalified) — membrane protein insertase YidC yidC

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.