MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1875 · 46 genes shown · anchor lldD2 · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1875 (requalified) — PPOX class F420-dependent oxidoreductase Rv1875 Rv1874 (family_assigned) — hypothetical protein Rv1874 lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 Rv3463 (requalified) — LLM class F420-dependent oxidoreductase Rv3463 Rv1155 (requalified) — PPOX class F420-dependent oxidoreductase Rv1155 ahpC (requalified) — peroxiredoxin AhpC ahpC Rv1873 (family_assigned) — DUF1810 domain-containing protein Rv1873 Rv0121c (family_assigned) — TIGR03668 family PPOX class F420-dependent oxidore Rv0121c Rv3368c (family_assigned) — nitroreductase family protein Rv3368c Rv3060c (family_assigned) — FCD domain-containing protein Rv3060c Rv2125 (family_assigned) — PAC2 family protein Rv2125 Rv2714 (family_assigned) — PAC2 family protein Rv2714 Rv3268 (family_assigned) — hypothetical protein Rv3268 Rv0138 (family_assigned) — nuclear transport factor 2 family protein Rv0138 Rv2910c (family_assigned) — hypothetical protein Rv2910c Rv0293c (requalified) — alpha/beta fold hydrolase Rv0293c Rv0310c (family_assigned) — nuclear transport factor 2 family protein Rv0310c Rv3577 (requalified) — hypothetical protein Rv3577 Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c pykA (requalified) — pyruvate kinase pykA mftD (requalified) — pre-mycofactocin synthase MftD mftD pca (requalified) — pyruvate carboxylase pca Rv2455c (family_assigned) — 2-oxoacid:acceptor oxidoreductase subunit alpha Rv2455c mez (requalified) — NAD-dependent malic enzyme mez Rv2466c (family_assigned) — Rv2466c family mycothiol-dependent reductase Rv2466c rmlB (requalified) — dTDP-glucose 4%2C6-dehydratase rmlB rmlC (requalified) — dTDP-4-dehydrorhamnose 3%2C5-epimerase rmlC trxB1 (requalified) — thioredoxin trxB1 infA (requalified) — translation initiation factor IF-1 infA Rv3054c (requalified) — NADPH-dependent FMN reductase Rv3054c Rv1154c (family_assigned) — hypothetical protein Rv1154c omt (requalified) — class I SAM-dependent methyltransferase omt Rv1156 (requalified) — HhH-GPD-type base excision DNA repair protein Rv1156 Rv2216 (family_assigned) — TIGR01777 family oxidoreductase Rv2216 ahpD (requalified) — alkyl hydroperoxide reductase ahpD trxB2 (requalified) — thioredoxin-disulfide reductase trxB2 dipZ (requalified) — integral membrane C-type cytochrome biogenesis pro dipZ dsbF (requalified) — protein disulfide oxidoreductase dsbF thiX (family_assigned) — thioredoxin family protein thiX Rv3673c (family_assigned) — membrane-anchored thioredoxin-like protein Rv3673c Rv1870c (family_assigned) — hypothetical protein Rv1870c fusA2 (family_assigned) — elongation factor G-like protein EF-G2 fusA2 Rv3079c (requalified) — LLM class F420-dependent oxidoreductase Rv3079c Rv0122 (family_assigned) — hypothetical protein Rv0122 Rv0123 (family_assigned) — DNA-binding protein Rv0123 dnaE2 (requalified) — error-prone DNA polymerase dnaE2

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.