MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1870c · 46 genes shown · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1870c (family_assigned) — hypothetical protein Rv1870c rho (requalified) — transcription termination factor Rho rho Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c coaE (requalified) — dephospho-CoA kinase coaE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA yidC (requalified) — membrane protein insertase YidC yidC Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv3920c (family_assigned) — R3H domain-containing nucleic acid-binding protein Rv3920c lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 trpA (family_assigned) — tryptophan synthase subunit alpha trpA end (requalified) — deoxyribonuclease IV end rnhB (requalified) — ribonuclease HII rnhB lgt (requalified) — prolipoprotein diacylglyceryl transferase lgt rpoA (family_assigned) — DNA-directed RNA polymerase subunit alpha rpoA rpmE (requalified) — 50S ribosomal protein L31 rpmE gpsI (requalified) — polyribonucleotide nucleotidyltransferase gpsI rpoB (family_assigned) — DNA-directed RNA polymerase subunit beta rpoB rpoC (family_assigned) — DNA-directed RNA polymerase subunit beta' rpoC fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA carD (requalified) — RNA polymerase-binding transcription factor CarD carD tuf (requalified) — elongation factor Tu tuf cspA (requalified) — cold shock protein CspA cspA kdtB (requalified) — pantetheine-phosphate adenylyltransferase kdtB acpS (requalified) — holo-ACP synthase acpS rpsA (requalified) — 30S ribosomal protein S1 rpsA polA (requalified) — DNA polymerase I polA def (requalified) — peptide deformylase def Rv0428c (family_assigned) — GNAT family N-acetyltransferase Rv0428c mutY (requalified) — A/G-specific adenine glycosylase mutY lppK (family_assigned) — hypothetical protein lppK dnaN (family_assigned) — DNA polymerase III subunit beta dnaN rnpA (requalified) — ribonuclease P protein component rnpA secY (family_assigned) — preprotein translocase subunit SecY secY yidD (requalified) — membrane protein insertion efficiency factor YidD yidD secG (family_assigned) — preprotein translocase subunit SecG secG secE1 (requalified) — preprotein translocase SecE secE1 Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 nirD (family_assigned) — nitrite reductase small subunit NirD nirD rubA (requalified) — rubredoxin rubA rubB (requalified) — rubredoxin RubB rubB gid (requalified) — 16S rRNA (guanine(527)-N(7))-methyltransferase Rsm gid Rv2908c (family_assigned) — RNA-binding protein Rv2908c parB (family_assigned) — ParB/RepB/Spo0J family partition protein parB pykA (requalified) — pyruvate kinase pykA mftD (requalified) — pre-mycofactocin synthase MftD mftD pca (requalified) — pyruvate carboxylase pca

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.