MTBC Gene Atlas

Functional interaction network

STRING v12 network (guilt-by-association). Node colour = annotation verdict, dashed outline = still hypothetical; edge colour = evidence type, width ∝ score. Drag nodes to rearrange, hover to highlight neighbours, click a partner to re-centre, click the centre to open its gene page.

Centre Rv1869c · 46 genes shown · anchor nirD · open gene page → · ← back to 1 hop

Evidence: Min score 0
Rv1869c (requalified) — FAD-dependent oxidoreductase Rv1869c Rv0688 (requalified) — FAD/NAD(P)-binding oxidoreductase Rv0688 nirD (family_assigned) — nitrite reductase small subunit NirD nirD Rv1870c (family_assigned) — hypothetical protein Rv1870c rubA (requalified) — rubredoxin rubA rubB (requalified) — rubredoxin RubB rubB Rv1871c (family_assigned) — nitroreductase family deazaflavin-dependent oxidor Rv1871c Rv2633c (requalified) — non-heme di-iron catalase Rv2633c Rv3818 (requalified) — MBL fold metallo-hydrolase Rv3818 gltB (family_assigned) — glutamate synthase large subunit gltB narG (family_assigned) — nitrate reductase subunit alpha narG narX (family_assigned) — respiratory nitrate reductase subunit gamma narX hemD (requalified) — uroporphyrin-III C-methyltransferase hemD Rv0687 (family_assigned) — Rv0687 family mycofactocin-dependent SDR oxidoredu Rv0687 nirB (family_assigned) — nitrite reductase large subunit NirB nirB narH (family_assigned) — nitrate reductase subunit beta narH narI (family_assigned) — respiratory nitrate reductase subunit gamma narI narU (family_assigned) — NarK family nitrate/nitrite MFS transporter narU rho (requalified) — transcription termination factor Rho rho coaE (requalified) — dephospho-CoA kinase coaE xthA (requalified) — exodeoxyribonuclease III protein XthA xthA yidC (requalified) — membrane protein insertase YidC yidC alkB (requalified) — alkane 1-monooxygenase alkB Rv3249c (family_assigned) — TetR family transcriptional regulator Rv3249c Rv3253c (requalified) — amino acid permease Rv3253c lldD2 (requalified) — quinone-dependent L-lactate dehydrogenase lldD2 fbpA (requalified) — diacylglycerol acyltransferase/mycolyltransferase fbpA carD (requalified) — RNA polymerase-binding transcription factor CarD carD tuf (requalified) — elongation factor Tu tuf cspA (requalified) — cold shock protein CspA cspA Rv2632c (family_assigned) — DUF1876 domain-containing protein Rv2632c Rv3896c (requalified) — transglycosylase Rv3896c Rv0955 (family_assigned) — DUF6350 family protein Rv0955 Rv1978 (requalified) — class I SAM-dependent methyltransferase Rv1978 Rv3819 (dark) — hypothetical protein Rv3819 cysG (requalified) — uroporphyrinogen-III C-methyltransferase cysG gltD (family_assigned) — glutamate synthase subunit beta gltD fprA (requalified) — ferredoxin--NADP(+) reductase FprA fprA fadH (requalified) — NADPH-dependent 2%2C4-dienoyl-CoA reductase fadH fprB (requalified) — FAD-dependent oxidoreductase fprB carB (family_assigned) — carbamoyl-phosphate synthase large subunit carB glnA1 (requalified) — type I glutamate--ammonia ligase glnA1 narJ (family_assigned) — nitrate reductase subunit delta narJ narK2 (requalified) — nitrate transporter NarK narK2 narK1 (requalified) — nitrate/nitrite transporter narK1 narK3 (requalified) — nitrate/nitrite transporter narK3

edges: ▬ experimental/database (measured) · ▬ genomic-context · ▬ co-expression / other  |  nodes: ● resolved · ● family assigned · ● dark · dashed = hypothetical.